Consensus flow list

Changes

20
# Step Field From To Why
23,960 bootstrap_labels prefLabel [{"@value":"Glufosinate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
23,961 bootstrap_labels name Glufosinate Purged legacy name field to enforce prefLabel usage
23,962 bootstrap_labels synonyms ["4-[hydroxy(methyl)phosphinoyl]-DL-homoalanine"] [] Removed legacy synonyms field in favor of structured labels
126,544 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
126,545 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
220,746 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
227,099 ec_cross_check ec_numbers [] ["257-102-5"] Resolved from EC-inventory: 257-102-5 from CAS 51276-47-2
247,977 enrich_references skos_definition [{"@value":"A racemate comprising equimolar amounts of (2S)-gluphosinate (better known as gluphosinate-P) and (2R)-glup… Merged ChEBI/PubChem definitions into skos:definition
247,978 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=51276-47-2","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['51276-47-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_52136']; candidate_pubchem_cids=[4794, 5257280, 6336531, 6971307]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
257,332 chebi_altlabels altLabel [] [{"@value":"(+-)-phosphinothricin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,426 consensus_match altLabel [{"@value":"(+-)-phosphinothricin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"(+-)-phosphinothricin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… group_key=glufosinate||dimension=Environmental > media=Ground > geography=Agricultural; cas=51276-47-2; added Common Chemistry CAS names as altLabel: (±)-Phosphinothricin, 2-Amino-4-[hydroxy(methyl)phosphoryl]butanoic acid, Butanoic acid, 2-amino-4-(hydroxymethylphosphinyl)-, HOE 35956; object_uuid=fo-14a44fdd08950e78
267,427 consensus_match cas_match_labels {"51276-47-2":"exactMatch"} group_key=glufosinate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'51276-47-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-14a44fdd08950e78: {'51276-47-2': 'exactMatch'}
279,605 opsin_iupac properties {} {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2RS)-2-amino-4-[hydroxy(methyl)phosphinoyl]butyric acid'
279,789 rdkit_authoritative properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… rdkit_authoritative: set definitive structural data from unique InChI
286,490 rdkit_post_consensus properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… rdkit_post_consensus from 'CP(=O)(O)CCC(N)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,780 strip_catalogue_altlabels altLabel [{"@value":"(+-)-phosphinothricin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"(+-)-phosphinothricin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… Removed 1 catalogue altLabel value(s): 'HOE 35956' (grade code)
344,294 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/812a1280-2c43-… associations resolved on the elementary layer
394,006 normalise_property_values properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… typed the way the ontology types it
403,329 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
403,330 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

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