Consensus flow list

Changes

32
# Step Field From To Why
633 bootstrap_labels prefLabel [{"@value":"Dichromate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
634 bootstrap_labels name Dichromate Purged legacy name field to enforce prefLabel usage
26,332 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
26,333 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
97,342 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
97,343 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
103,492 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
103,493 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
140,156 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
140,157 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
213,551 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,686 commonchem_cas_review cas_numbers [] ["13907-47-6"] Set CAS from Common Chemistry exact name match (flow had none): 13907-47-6
226,687 commonchem_cas_review cas_number_sources {"13907-47-6":{"prov:wasGeneratedBy":"commonchem_cas_review","prov:wasAttributedTo":"consensus-flow-list","prov:hadPrim… Attach provenance for Common Chemistry CAS fill-ins
227,776 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0)
227,777 enrich_references skos_definition [{"@value":"A divalent inorganic anion obtained by removal of both protons from dichromic acid.","@language":"en","prov… Merged ChEBI/PubChem definitions into skos:definition
227,778 enrich_references references [] [{"@id":"gmelin:26867","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['13907-47-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33141']; candidate_pubchem_cids=[]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,485 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7","Cr… rdkit_pre_consensus from '[O]=[Cr](=[O])([O-])[O][Cr](=[O])(=[O])[O-]'; added: molecular_formula, monoisotopic_mass
254,465 chebi_altlabels altLabel [] [{"@value":"Cr2O7(2-)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,867 consensus_match altLabel [{"@value":"Cr2O7(2-)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… [{"@value":"Cr2O7(2-)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… group_key=dichromate||dimension=Environmental > media=Water > water_body=Unknown; cas=13907-47-6; added Common Chemistry CAS names as altLabel: Chromate (Cr<sub>2</sub>O<sub>7</sub><sup>2-</sup>), Chromic acid (H<sub>2</sub>Cr<sub>2</sub>O<sub>7</sub>), ion(2-), Dichromate (Cr<sub>2</sub>O<sub>7</sub><sup>2-</sup>), Dichromate ion, Dichromate ion (Cr<sub>2</sub>O<sub>7</sub><sup>2-</sup>); object_uuid=fo-3688a4f4f00321df
265,868 consensus_match cas_match_labels {"13907-47-6":"exactMatch"} group_key=dichromate||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi']; cas_sources={'13907-47-6': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-3688a4f4f00321df: {'13907-47-6': 'exactMatch'}
273,627 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7","Cr… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7","Cr… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Dichromate'
279,990 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7","Cr… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7","Cr… rdkit_post_consensus from '[O]=[Cr](=[O])([O-])[O][Cr](=[O])(=[O])[O-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,002 dedupe_altlabels altLabel [{"@value":"Cr2O7(2-)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… [{"@value":"Cr2O7(2-)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… Deduplicated altLabel values and removed entries matching prefLabel
293,731 pipeline.deduplication owl_deprecated yes duplicate of 5a630ec5-549b-458c-984c-f5f8faf7f638
293,732 pipeline.deduplication dcterms_is_replaced_by urn:uuid:5a630ec5-549b-458c-984c-f5f8faf7f638 duplicate of 5a630ec5-549b-458c-984c-f5f8faf7f638
293,733 pipeline.deduplication is_replaced_by_uuid 5a630ec5-549b-458c-984c-f5f8faf7f638 duplicate of 5a630ec5-549b-458c-984c-f5f8faf7f638
294,230 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/00a23df6-190a-… associations resolved on the elementary layer
329,688 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4fb827a9-babe-… associations resolved on the elementary layer
332,763 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/5a630ec5-549b-… associations resolved on the elementary layer
351,099 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/981b8841-ce43-… associations resolved on the elementary layer
387,903 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7","Cr… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr2O7","Cr… typed the way the ontology types it
394,438 link_flows_to_their_substance types ["https://w3id.org/chemrof/MolecularAnion"] the substance's answer, copied onto its flow

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