Consensus flow list

Changes

24
# Step Field From To Why
25,521 bootstrap_labels prefLabel [{"@value":"osmium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Bootstrapped prefLabel from legacy name field
25,522 bootstrap_labels name osmium Purged legacy name field to enforce prefLabel usage
25,523 bootstrap_labels synonyms ["(189os)osmium","(193os)osmium","76Os","AC1L2N3J","AC1Q22WS","KST-1A2427","KST-1A2479","Metallic osmium","OS","OS4","O… [] Removed legacy synonyms field in favor of structured labels
185,220 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
185,221 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
221,026 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,614 normalize_name_case prefLabel [{"@value":"osmium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Osmium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,134 ec_cross_check ec_numbers [] ["231-114-0"] Resolved from EC-inventory: 231-114-0 from CAS 7440-04-2
248,243 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Os"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
248,244 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
248,245 enrich_references references [] [{"@id":"gmelin:16234","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7440-04-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30687']; candidate_pubchem_cids=[23937]; selected_pubchem_cids=[23937]; formula_similarity_expected=['Os']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,372 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Os"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Os"],"atte… rdkit_pre_consensus from '[Os]'; added: monoisotopic_mass
257,399 chebi_altlabels altLabel [] [{"@value":"76Os","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,211 consensus_match altLabel [{"@value":"76Os","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"76Os","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=osmium||dimension=Resource > media=Ground; cas=7440-04-2; added Common Chemistry CAS names as altLabel: MeSH ID: D009992, NSC 607770, NSC 607771, NSC 607772; object_uuid=fo-38d3c51b088a3f13
270,212 consensus_match cas_match_labels {"7440-04-2":"exactMatch"} group_key=osmium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-04-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-38d3c51b088a3f13: {'7440-04-2': 'exactMatch'}
279,746 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Os"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Os"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Osmium'
279,795 rdkit_authoritative properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Os"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_authoritative: set definitive structural data from unique InChI
286,643 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_post_consensus from '[Os]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,867 strip_catalogue_altlabels altLabel [{"@value":"76Os","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"76Os","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Removed 3 catalogue altLabel value(s): 'NSC 607770' (registry code), 'NSC 607771' (registry code), 'NSC 607772' (registry code)
373,657 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/e2fab6b2-6555-… associations resolved on the elementary layer
394,157 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… typed the way the ontology types it
403,684 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
403,685 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… the substance's answer, copied onto its flow
403,864 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Osmium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Osmium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichme… element name from the flow object: Osmium

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