Consensus flow list

Changes

22
# Step Field From To Why
11,584 bootstrap_labels prefLabel [{"@value":"protactinium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
11,585 bootstrap_labels name protactinium Purged legacy name field to enforce prefLabel usage
11,586 bootstrap_labels synonyms ["(227pa)protactinium","(231pa)protactinium","(233pa)protactinium","(234pa)protactinium","91Pa","AC1L2N3R","AC1Q22X0","… [] Removed legacy synonyms field in favor of structured labels
44,744 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
44,745 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
217,186 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,792 normalize_name_case prefLabel [{"@value":"protactinium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Protactinium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
238,211 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
238,212 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
238,213 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J95.330J","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['7440-13-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33386']; candidate_pubchem_cids=[23945]; selected_pubchem_cids=[23945]; formula_similarity_expected=['Pa']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,492 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… rdkit_pre_consensus from '[Pa]'; added: monoisotopic_mass
255,990 chebi_altlabels altLabel [] [{"@value":"91Pa","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,179 consensus_match altLabel [{"@value":"91Pa","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"91Pa","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=protactinium||dimension=Resource > media=Ground; cas=7440-13-3; added Common Chemistry CAS names as altLabel: Eka-tantalum, MeSH ID: D011478, Uranium X, V-X<sub>2</sub> Pa; object_uuid=fo-51208fec587aa216
271,180 consensus_match cas_match_labels {"7440-13-3":"exactMatch"} group_key=protactinium||dimension=Resource > media=Ground; group_sources=['chebi', 'pubchem']; cas_sources={'7440-13-3': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-51208fec587aa216: {'7440-13-3': 'exactMatch'}
276,686 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Protactinium'
283,312 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… rdkit_post_consensus from '[Pa]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,606 dedupe_altlabels altLabel [{"@value":"91Pa","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"91Pa","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Deduplicated altLabel values and removed entries matching prefLabel
303,418 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0d799ebc-6556-… associations resolved on the elementary layer
391,041 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… typed the way the ontology types it
398,906 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
398,907 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pa"],"atte… the substance's answer, copied onto its flow
403,825 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Protactinium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Protactinium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_en… element name from the flow object: Protactinium

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