Consensus flow list

Changes

57
# Step Field From To Why
19,400 bootstrap_labels prefLabel [{"@value":"arginine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
19,401 bootstrap_labels name arginine Purged legacy name field to enforce prefLabel usage
19,402 bootstrap_labels synonyms ["organic","arginine"] [] Removed legacy synonyms field in favor of structured labels
62,694 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
62,695 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
82,830 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
82,831 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
86,590 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
86,591 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
96,722 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
96,723 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
124,534 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
124,535 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
125,072 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
125,073 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
136,692 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
136,693 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
140,716 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
140,717 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
152,816 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
152,817 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
154,038 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
154,039 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-aicrhe Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
170,992 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
170,993 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
171,046 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
171,047 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
185,922 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
185,923 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
219,655 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,499 normalize_name_case prefLabel [{"@value":"arginine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Arginine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
245,215 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,216 enrich_references skos_definition [{"@value":"An L-α-amino acid that is the L-isomer of arginine.","@language":"en","provenance":{"prov:wasGeneratedBy":"… Merged ChEBI/PubChem definitions into skos:definition
245,217 enrich_references references [] [{"@id":"drugcentral:1549","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['74-79-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16467']; candidate_pubchem_cids=[232, 6322, 81609, 1549073, 5231987, 5246487]; selected_pubchem_cids=[6322]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,514 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2"… rdkit_pre_consensus from 'C(CC(C(=O)O)N)CN=C(N)N'; added: inchi2d_string, monoisotopic_mass
256,899 chebi_altlabels altLabel [] [{"@value":"(2S)-2-amino-5-(carbamimidamido)pentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,925 consensus_match altLabel [{"@value":"(2S)-2-amino-5-(carbamimidamido)pentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… [{"@value":"(2S)-2-amino-5-(carbamimidamido)pentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… group_key=arginine||dimension=Environmental > media=Air > strata=Unknown; cas=74-79-3; added Common Chemistry CAS names as altLabel: (2S)-2-Amino-5-(diaminomethylideneamino)pentanoic acid, (<em>S</em>)-2-Amino-5-[(aminoiminomethyl)amino]pentanoic acid, 102: PN: WO2022204151 SEQID: 102 claimed protein, 117: PN: WO2021061872 SEQID: 117 claimed protein, 11: PN: WO2022235295 SEQID: 117 claimed protein, 14: PN: US20240293544 SEQID: 117 claimed protein, 381: PN: WO2022056313 SEQID: 385 claimed protein, 393: PN: WO2023172654 SEQID: 395 claimed sequence, 3: PN: WO2022269549 PAGE: 98 claimed sequence, 42: PN: KR20200014684 SEQID: 105 claimed sequence, 42: PN: WO2020027640 SEQID: 105 claimed protein, 42: PN: WO2022204326 SEQID: 76 claimed protein, 87: PN: WO2022010798 SEQID: 89 claimed protein, <span class="text-smallcaps">L</span>-Norvaline, 5-[(aminoiminomethyl)amino]-, <span class="text-smallcaps">L</span>-Ornithine, <em>N</em><sup>5</sup>-(aminoiminomethyl)-, <span class="text-smallcaps">L</span>-α-Amino-δ-guanidinovaleric acid, A 0526, Arginine, <span class="text-smallcaps">L</span>-, L-arginine C Grade, MeSH ID: D001120, NSC 206269, Pentanoic acid, 2-amino-5-[(aminoiminomethyl)amino]-, (<em>S</em>)-; object_uuid=fo-54101824a69e50fd
263,926 consensus_match cas_match_labels {"74-79-3":"exactMatch"} group_key=arginine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'74-79-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-54101824a69e50fd: {'74-79-3': 'exactMatch'}
278,730 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Arginine'
285,513 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2"… rdkit_post_consensus from 'N=C(N)NCCC[C@H](N)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,156 strip_catalogue_altlabels altLabel [{"@value":"(2S)-2-amino-5-(carbamimidamido)pentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… [{"@value":"(2S)-2-amino-5-(carbamimidamido)pentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… Removed 2 catalogue altLabel value(s): 'A 0526' (grade code), 'NSC 206269' (registry code)
312,365 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/27ce0a6d-d237-… associations resolved on the elementary layer
322,429 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/45c59d8f-7115-… associations resolved on the elementary layer
324,311 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4c757b8d-dad1-… associations resolved on the elementary layer
329,359 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4eaf16a5-0b22-… associations resolved on the elementary layer
343,269 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/7d959d9e-f002-… associations resolved on the elementary layer
343,538 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/7e9135e9-1e19-… associations resolved on the elementary layer
349,342 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/9255b593-4933-… associations resolved on the elementary layer
351,359 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/990f88ca-1ff9-… associations resolved on the elementary layer
357,431 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/ad154df5-3175-… associations resolved on the elementary layer

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