Consensus flow list

Changes

23
# Step Field From To Why
15,400 bootstrap_labels prefLabel [{"@value":"samarium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
15,401 bootstrap_labels name samarium Purged legacy name field to enforce prefLabel usage
15,402 bootstrap_labels synonyms ["(151sm)samarium","(153sm)samarium","62Sm","AC1L2N3V","IN3070","KST-1A1798","KST-1A1826","samario"] [] Removed legacy synonyms field in favor of structured labels
51,286 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
51,287 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
218,412 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,640 normalize_name_case prefLabel [{"@value":"samarium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Samarium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,991 ec_cross_check ec_numbers [] ["231-128-7"] Resolved from EC-inventory: 231-128-7 from CAS 7440-19-9
241,718 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sm"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,719 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
241,720 enrich_references references [] [{"@id":"gmelin:16301","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7440-19-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33374']; candidate_pubchem_cids=[23951]; selected_pubchem_cids=[23951]; formula_similarity_expected=['Sm']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,512 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sm"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sm"],"atte… rdkit_pre_consensus from '[Sm]'; added: monoisotopic_mass
256,434 chebi_altlabels altLabel [] [{"@value":"62Sm","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,587 consensus_match altLabel [{"@value":"62Sm","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"62Sm","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=samarium||dimension=Resource > media=Ground; cas=7440-19-9; added Common Chemistry CAS names as altLabel: MeSH ID: D012493; object_uuid=fo-5bfc7a73a8d46ab8
271,588 consensus_match cas_match_labels {"7440-19-9":"exactMatch"} group_key=samarium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-19-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5bfc7a73a8d46ab8: {'7440-19-9': 'exactMatch'}
277,727 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sm"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sm"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Samarium'
279,780 rdkit_authoritative properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sm"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_authoritative: set definitive structural data from unique InChI
284,425 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_post_consensus from '[Sm]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
306,690 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/172a3da9-6556-… associations resolved on the elementary layer
392,082 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… typed the way the ontology types it
400,380 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
400,381 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… the substance's answer, copied onto its flow
403,835 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Samarium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Samarium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrich… element name from the flow object: Samarium

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