Consensus flow list

Changes

57
# Step Field From To Why
19,699 bootstrap_labels prefLabel [{"@value":"rifampicin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
19,700 bootstrap_labels name rifampicin Purged legacy name field to enforce prefLabel usage
19,701 bootstrap_labels synonyms ["(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-heptamethyl-… [] Removed legacy synonyms field in favor of structured labels
24,355 bootstrap_labels synonyms ["rifampicin","(7s,9e,11s,12r,13s,14r,15r,16r,17s,18s,19e,21z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22… [] Removed legacy synonyms field in favor of structured labels
64,284 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
64,285 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-aicrhe Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
94,440 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
94,441 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
94,442 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
94,443 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
94,444 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
94,445 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
94,446 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
94,447 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
94,448 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
94,449 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
94,450 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
94,451 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
94,452 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
94,453 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
94,454 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
94,455 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
94,456 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
94,457 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
138,572 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
138,573 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
204,168 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
204,169 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
204,170 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
204,171 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
219,744 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,569 normalize_name_case prefLabel [{"@value":"rifampicin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Rifampicin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
245,464 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C43H58N4O1… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,465 enrich_references skos_definition [{"@value":"A member of the class of rifamycins that is a a semisynthetic antibiotic derived from Amycolatopsis rifamyc… Merged ChEBI/PubChem definitions into skos:definition
245,466 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.032.997","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['13292-46-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28077']; candidate_pubchem_cids=[196968, 280886, 135398735, 135449527, 135512673, 135550179, 135671118, 135678740, 135876149, 135900090, 135921123, 135925261, 135925741, 135926172, 135932822, 136122621, 136246612, 136254574, 136265302, 136619758, 136662670, 137016821, 137086834, 137092548, 137138798, 137145976, 137177954, 137184936, 137191444, 137225336, 137270779, 137286743, 137704761, 138106897, 146161046, 154075449, 171360673, 172916695, 172966639, 176542861]; selected_pubchem_cids=[135398735]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,587 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C43H58N4O1… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C43H58N4O1… rdkit_pre_consensus from 'CC1C=CC=C(C(=O)NC2=C(C(=C3C(=C2O)C(=C(C4=C3C(=O)C(O4)(OC=CC(C(C(C(C(C(C1O)C)O)C)OC(=O)C)C)OC)C)C)O)O)C=NN5CCN(CC5)C)C'; added: inchi2d_string, monoisotopic_mass
256,942 chebi_altlabels altLabel [] [{"@value":"(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-he… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,488 consensus_match altLabel [{"@value":"(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-he… [{"@value":"(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-he… group_key=rifampicin||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=13292-46-1; added Common Chemistry CAS names as altLabel: 2,7-(Epoxypentadeca[1,11,13]trienimino)naphtho[2,1-<em>b</em>]furan, rifamycin deriv., 2,7-(Epoxypentadeca[1,11,13]trienimino)naphtho[2,1-<em>b</em>]furan-1,11(2<em>H</em>)-dione, 5,6,9,17,19,21-hexahydroxy-23-methoxy-2,4,12,16,18,20,22-heptamethyl-8-[<em>N</em>-(4-methyl-1-piperazinyl)formimidoyl]-, 21-acetate, 2,7-(Epoxypentadeca[1,11,13]trienimino)naphtho[2,1-<em>b</em>]furan-1,11(2<em>H</em>)-dione, 5,6,9,17,19,21-hexahydroxy-23-methoxy-2,4,12,16,20,22-heptamethyl-8-[<em>N</em>-(4-methyl-1-piperazinyl)formimidoyl]-, 21-acetate, 3-[(4-Methyl-1-piperazinyl)iminomethyl]rifamycin SV, 3-[[(4-Methyl-1-piperazinyl)imino]methyl]rifamycin, 5,6,9,17,19,21-Hexahydroxy-23-methoxy-2,4,12,16,18,20,22-heptamethyl-8-[<em>N</em>-(4-methyl-1-piperazinyl)formimidoyl]-2,7-(epoxypentadeca[1,11,13]trienimino)-naphtho[2,1-<em>b</em>]furan-1,11(2<em>H</em>)-dione 21-acetate, Abrifam, Ba 41166/E, Eremfat, Famcin, L 5103 Lepetit, NIH 10782, NSC 113926, R-Cin, R/AMP, Refampicin, Rifa, Rifacap, Rifactine, Rifadin, Rifadine, Rifaldazine, Rifaldin, Rifampicin SV, Rifamycin AMP, Rifamycin, 3-[[(4-methyl-1-piperazinyl)imino]methyl]-, Rifaprodin, Rifodex, Rifoldin, Rifoldine, Riforal, Rimactan, Rimactane, Rimapen, Sinerdol, Tubocin; object_uuid=fo-71973b84f04dabf6
271,489 consensus_match cas_match_labels {"13292-46-1":"exactMatch"} group_key=rifampicin||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13292-46-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-71973b84f04dabf6: {'13292-46-1': 'exactMatch'}
285,597 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C43H58N4O1… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C43H58N4O1… rdkit_post_consensus from 'CC1C=CC=C(C(=O)NC2=C(C(=C3C(=C2O)C(=C(C4=C3C(=O)C(O4)(OC=CC(C(C(C(C(C(C1O)C)O)C)OC(=O)C)C)OC)C)C)O)O)C=NN5CCN(CC5)C)C'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass
291,201 strip_catalogue_altlabels altLabel [{"@value":"(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-he… [{"@value":"(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-he… Removed 2 catalogue altLabel value(s): 'NIH 10782' (grade code), 'NSC 113926' (registry code)
313,160 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/29068975-6556-… associations resolved on the elementary layer
328,222 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
328,223 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
328,224 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
328,225 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
328,226 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
328,227 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
328,228 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
328,229 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer

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