L-serine
Everything that changed this substance, across every flow that resolves to it. Back to the substance
fo-7e658debdb663f3c
Changes
57| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,904 | bootstrap_labels | prefLabel | — | [{"@value":"l-serine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brigh… | Bootstrapped prefLabel from legacy name field |
| 1,905 | bootstrap_labels | name | l-serine | — | Purged legacy name field to enforce prefLabel usage |
| 1,906 | bootstrap_labels | synonyms | ["organic","l-serine"] | [] | Removed legacy synonyms field in favor of structured labels |
| 27,235 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| 27,236 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-noag | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| 48,143 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 48,144 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 60,177 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","indoor":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 60,178 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 62,211 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 62,212 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 79,657 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Surface water"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 79,658 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-suwa | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 103,015 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 103,016 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 111,153 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 111,154 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-agri | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 125,323 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 125,324 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 127,187 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 127,188 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 128,333 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 128,334 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 139,653 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 139,654 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 166,391 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 166,392 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 175,475 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 175,476 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 213,976 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,539 | normalize_name_case | prefLabel | [{"@value":"l-serine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brigh… | [{"@value":"L-serine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brigh… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 229,016 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO3"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 229,017 | enrich_references | skos_definition | — | [{"@value":"The L-enantiomer of serine.","@language":"en","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_… | Merged ChEBI/PubChem definitions into skos:definition |
| 229,018 | enrich_references | references | [] | [{"@id":"drugcentral:4127","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['56-45-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17115']; candidate_pubchem_cids=[617, 5951, 71077, 79607, 6857581, 22567336]; selected_pubchem_cids=[5951]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,851 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO3"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO3"],… | rdkit_pre_consensus from 'C(C(C(=O)O)N)O'; added: inchi2d_string, monoisotopic_mass |
| 254,608 | chebi_altlabels | altLabel | [] | [{"@value":"(2S)-2-amino-3-hydroxypropanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | Added 17 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 268,301 | consensus_match | altLabel | [{"@value":"(2S)-2-amino-3-hydroxypropanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | [{"@value":"(2S)-2-amino-3-hydroxypropanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | group_key=l-serine||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=56-45-1; added Common Chemistry CAS names as altLabel: (-)-Serine, (2S)-2-Azaniumyl-3-hydroxypropanoate, (<em>S</em>)-α-Amino-β-hydroxypropionic acid, 10: PN: WO2021055880 SEQID: 11 claimed protein, 160: PN: WO2022103927 SEQID: 197 claimed protein, 1: PN: WO2025087436 PAGE: 223 sequence, 2: PN: WO2020113403 TABLE: L1 claimed sequence, 2: PN: WO2024080304 PAGE: 283 claimed sequence, 31: PN: WO2022257479 PAGE: 22 claimed sequence, 4: PN: CN120157754 SEQID: 165 protein, 4: PN: WO2020191289 PAGE: 118 claimed sequence, 4: PN: WO2025124489 SEQID: 165 protein, 5: PN: WO2021127752 SEQID: 15 claimed sequence, 78: PN: WO2025117649 SEQID: 87 sequence, <span class="text-smallcaps">L</span>-Alanine, 3-hydroxy-, MeSH ID: D012694, Propanoic acid, 2-amino-3-hydroxy-, (<em>S</em>)-, Serine, <span class="text-smallcaps">L</span>-, β-Hydroxy-<span class="text-smallcaps">L</span>-alanine; object_uuid=fo-7e658debdb663f3c |
| 268,302 | consensus_match | cas_match_labels | — | {"56-45-1":"exactMatch"} | group_key=l-serine||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56-45-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7e658debdb663f3c: {'56-45-1': 'exactMatch'} |
| 273,974 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO3"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO3"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'L-serine' |
| 280,374 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO3"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO3"],… | rdkit_post_consensus from 'N[C@@H](CO)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,077 | dedupe_altlabels | altLabel | [{"@value":"(2S)-2-amino-3-hydroxypropanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | [{"@value":"(2S)-2-amino-3-hydroxypropanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | Deduplicated altLabel values and removed entries matching prefLabel |
| 294,702 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/024fc774-cd35-… | associations resolved on the elementary layer |
| 305,139 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1240e008-3a1d-… | associations resolved on the elementary layer |
| 311,148 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/23678b04-84b9-… | associations resolved on the elementary layer |
| 312,165 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/26e0bb52-e5f0-… | associations resolved on the elementary layer |
| 320,881 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/40279906-8ca9-… | associations resolved on the elementary layer |
| 332,543 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/598c2bcd-2d8d-… | associations resolved on the elementary layer |
| 336,613 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/67166e95-9da9-… | associations resolved on the elementary layer |
| 343,700 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/7efb3b0a-eb67-… | associations resolved on the elementary layer |
| 344,632 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/822fa4e9-7722-… | associations resolved on the elementary layer |