Consensus flow list

Changes

23
# Step Field From To Why
7,417 bootstrap_labels prefLabel [{"@value":"germanium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
7,418 bootstrap_labels name germanium Purged legacy name field to enforce prefLabel usage
7,419 bootstrap_labels synonyms ["32Ge","AC1O3F16","Ge(2+)","Ge(4+)","Ge(4-)","Germanium (Ge(4+))","Germanium (IV) ion","Germanium element","Germanium,… [] Removed legacy synonyms field in favor of structured labels
34,158 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
34,159 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
215,820 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,819 normalize_name_case prefLabel [{"@value":"germanium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Germanium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,823 ec_cross_check ec_numbers [] ["231-164-3"] Resolved from EC-inventory: 231-164-3 from CAS 7440-56-4
234,293 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ge"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0)
234,294 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
234,295 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=7440-56-4","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['7440-56-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30441']; candidate_pubchem_cids=[23984, 6326954]; selected_pubchem_cids=[]; formula_similarity_expected=['Ge']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,371 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ge"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ge"],"atte… rdkit_pre_consensus from '[Ge]'; added: monoisotopic_mass
255,364 chebi_altlabels altLabel [] [{"@value":"32Ge","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,418 consensus_match altLabel [{"@value":"32Ge","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"32Ge","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=germanium||dimension=Resource > media=Ground; cas=7440-56-4; added Common Chemistry CAS names as altLabel: Germanium element, MeSH ID: D005857; object_uuid=fo-fa44c46138aee169
267,419 consensus_match cas_match_labels {"7440-56-4":"exactMatch"} group_key=germanium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-56-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fa44c46138aee169: {'7440-56-4': 'exactMatch'}
275,541 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ge"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ge"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Germanium'
279,770 rdkit_authoritative properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ge"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_authoritative: set definitive structural data from unique InChI
282,061 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_post_consensus from '[Ge]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
298,133 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
389,855 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… typed the way the ontology types it
397,197 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
397,198 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… the substance's answer, copied onto its flow
403,797 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Germanium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Germanium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enric… element name from the flow object: Germanium

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