Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 123649' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=methyl3-amino-2-pyrazinecarboxylate||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'16298-03-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2388a407e1e74778: {'16298-03-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['16298-03-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_145238']; candidate_pubchem_cids=[72669, 135447048]; selected_pubchem_cids=[72669]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
102 bootstrap_labels prefLabel [{"@value":"methyl 3-amino-2-pyrazinecarboxylate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","… Bootstrapped prefLabel from legacy name field
103 bootstrap_labels name methyl 3-amino-2-pyrazinecarboxylate Purged legacy name field to enforce prefLabel usage
104 bootstrap_labels synonyms ["organic","methyl3-aminopyrazinecarboxylate"] [] Removed legacy synonyms field in favor of structured labels
25,960 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
25,961 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
213,372 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,121 normalize_name_case prefLabel [{"@value":"methyl 3-amino-2-pyrazinecarboxylate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","… [{"@value":"Methyl 3-amino-2-pyrazinecarboxylate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,265 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,266 enrich_references skos_definition [{"@value":"A pyrazine that is substituted by a methoxycarbonyl group at position 2 and an amino group at position 3.",… Merged ChEBI/PubChem definitions into skos:definition
227,267 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J236.297J","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['16298-03-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_145238']; candidate_pubchem_cids=[72669, 135447048]; selected_pubchem_cids=[72669]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,338 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… rdkit_pre_consensus from 'COC(=O)C1=NC=CN=C1N'; added: monoisotopic_mass
254,403 chebi_altlabels altLabel [] [{"@value":"3-aminopyrazine-2-carboxylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,754 consensus_match altLabel [{"@value":"3-aminopyrazine-2-carboxylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… [{"@value":"3-aminopyrazine-2-carboxylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… group_key=methyl3-amino-2-pyrazinecarboxylate||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=16298-03-6; added Common Chemistry CAS names as altLabel: 2-Amino-3-(methoxycarbonyl)pyrazine, 2-Pyrazinecarboxylic acid, 3-amino-, methyl ester, Methyl 2-aminopyrazine-3-carboxylate, NSC 123649, Pyrazinecarboxylic acid, 3-amino-, methyl ester, Pyrazinoic acid, 3-amino-, methyl ester; object_uuid=fo-2388a407e1e74778
268,755 consensus_match cas_match_labels {"16298-03-6":"exactMatch"} group_key=methyl3-amino-2-pyrazinecarboxylate||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'16298-03-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2388a407e1e74778: {'16298-03-6': 'exactMatch'}
273,481 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methyl 3-amino-2-pyrazinecarboxylate'
279,832 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… rdkit_post_consensus from 'COC(=O)c1nccnc1N'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,289 strip_catalogue_altlabels altLabel [{"@value":"3-aminopyrazine-2-carboxylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… [{"@value":"3-aminopyrazine-2-carboxylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_alt… Removed 1 catalogue altLabel value(s): 'NSC 123649' (registry code)
294,044 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0017c7c1-f225-… associations resolved on the elementary layer
387,762 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7N3O2"]… typed the way the ontology types it
394,226 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/102 prefLabel ef:agent/bootstrap_labels ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v0 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v1
ef:activity/change/20260820T0738569779880000/103 name ef:agent/bootstrap_labels ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v1 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v2
ef:activity/change/20260820T0738569779880000/104 synonyms ef:agent/bootstrap_labels ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v2 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v3
ef:activity/change/20260820T0738569779880000/25960 context ef:agent/default_context_mapping ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v3 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v4
ef:activity/change/20260820T0738569779880000/25961 context_iri ef:agent/default_context_mapping ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v4 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v5
ef:activity/change/20260820T0738569779880000/213372 unit_iri ef:agent/unit_normalization ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v5 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v6
ef:activity/change/20260820T0738569779880000/221121 prefLabel ef:agent/normalize_name_case ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v6 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v7
ef:activity/change/20260820T0738569779880000/227265 properties ef:agent/enrich_references ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v7 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v8
ef:activity/change/20260820T0738569779880000/227266 skos_definition ef:agent/enrich_references ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v8 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v9
ef:activity/change/20260820T0738569779880000/227267 references ef:agent/enrich_references ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v9 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v10
ef:activity/change/20260820T0738569779880000/248338 properties ef:agent/rdkit_pre_consensus ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v10 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v11
ef:activity/change/20260820T0738569779880000/254403 altLabel ef:agent/chebi_altlabels ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v11 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v12
ef:activity/change/20260820T0738569779880000/268754 altLabel ef:agent/consensus_match ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v12 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v13
ef:activity/change/20260820T0738569779880000/268755 cas_match_labels ef:agent/consensus_match ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v13 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v14
ef:activity/change/20260820T0738569779880000/273481 properties ef:agent/opsin_iupac ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v14 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v15
ef:activity/change/20260820T0738569779880000/279832 properties ef:agent/rdkit_post_consensus ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v15 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v16
ef:activity/change/20260820T0738569779880000/287289 altLabel ef:agent/strip_catalogue_altlabels ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v16 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v17
ef:activity/change/20260820T0738569779880000/294044 concept_associations ef:agent/carry_associations_onto_flows ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v17 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v18
ef:activity/change/20260820T0738569779880000/387762 properties ef:agent/normalise_property_values ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v18 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v19
ef:activity/change/20260820T0738569779880000/394226 types ef:agent/link_flows_to_their_substance ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v19 ef:flow/0017c7c1-f225-4d81-b57e-c00ddbd33d4f/v20

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