Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=nickel(2+)sulfate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7786-81-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6a67754cb80fcf57: {'7786-81-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7786-81-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_53001']; candidate_pubchem_cids=[24586, 24186470]; selected_pubchem_cids=[24586]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
438 bootstrap_labels prefLabel [{"@value":"nickel(2+) sulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
439 bootstrap_labels name nickel(2+) sulfate Purged legacy name field to enforce prefLabel usage
440 bootstrap_labels synonyms ["inorganic","nickelsulfate","nickelsulphate","coarsedischarge","conc1","der","intermediatenickelcontainingproduct","ni… [] Removed legacy synonyms field in favor of structured labels
26,194 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
26,195 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
213,485 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,195 normalize_name_case prefLabel [{"@value":"nickel(2+) sulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Nickel(2+) Sulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,588 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,589 enrich_references skos_definition [{"@value":"A metal sulfate having nickel(2+) as the metal ion.","@language":"en","provenance":{"prov:wasGeneratedBy":"… Merged ChEBI/PubChem definitions into skos:definition
227,590 enrich_references references [] [{"@id":"gmelin:8299","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['7786-81-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_53001']; candidate_pubchem_cids=[24586, 24186470]; selected_pubchem_cids=[24586]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,434 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… rdkit_pre_consensus from 'O=S(=O)([O-])[O-].[Ni+2]'; added: monoisotopic_mass
254,441 chebi_altlabels altLabel [] [{"@value":"NiSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
269,864 consensus_match altLabel [{"@value":"NiSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"NiSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… group_key=nickel(2+)sulfate||dimension=Environmental > media=Ground > geography=Agricultural; cas=7786-81-4; added Common Chemistry CAS names as altLabel: Fine Emerald, Nickel monosulfate, Nickel sulfate (1:1), Nickel sulfate (NiSO<sub>4</sub>), Nickel(2+) sulfate (1:1), Nickelous sulfate, Sulfuric acid nickel(2+) salt, Sulfuric acid, nickel(2+) salt (1:1); object_uuid=fo-6a67754cb80fcf57
269,865 consensus_match cas_match_labels {"7786-81-4":"exactMatch"} group_key=nickel(2+)sulfate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7786-81-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6a67754cb80fcf57: {'7786-81-4': 'exactMatch'}
273,573 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Nickel(2+) Sulfate'
279,933 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… rdkit_post_consensus from 'O=S(=O)([O-])[O-].[Ni+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,993 dedupe_altlabels altLabel [{"@value":"NiSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"NiSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Deduplicated altLabel values and removed entries matching prefLabel
294,161 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0072d30d-1054-… associations resolved on the elementary layer
387,852 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ni.O4S","N… typed the way the ontology types it
394,360 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/438 prefLabel ef:agent/bootstrap_labels ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v0 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v1
ef:activity/change/20260820T0738569779880000/439 name ef:agent/bootstrap_labels ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v1 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v2
ef:activity/change/20260820T0738569779880000/440 synonyms ef:agent/bootstrap_labels ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v2 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v3
ef:activity/change/20260820T0738569779880000/26194 context ef:agent/default_context_mapping ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v3 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v4
ef:activity/change/20260820T0738569779880000/26195 context_iri ef:agent/default_context_mapping ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v4 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v5
ef:activity/change/20260820T0738569779880000/213485 unit_iri ef:agent/unit_normalization ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v5 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v6
ef:activity/change/20260820T0738569779880000/221195 prefLabel ef:agent/normalize_name_case ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v6 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v7
ef:activity/change/20260820T0738569779880000/227588 properties ef:agent/enrich_references ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v7 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v8
ef:activity/change/20260820T0738569779880000/227589 skos_definition ef:agent/enrich_references ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v8 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v9
ef:activity/change/20260820T0738569779880000/227590 references ef:agent/enrich_references ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v9 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v10
ef:activity/change/20260820T0738569779880000/248434 properties ef:agent/rdkit_pre_consensus ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v10 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v11
ef:activity/change/20260820T0738569779880000/254441 altLabel ef:agent/chebi_altlabels ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v11 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v12
ef:activity/change/20260820T0738569779880000/269864 altLabel ef:agent/consensus_match ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v12 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v13
ef:activity/change/20260820T0738569779880000/269865 cas_match_labels ef:agent/consensus_match ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v13 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v14
ef:activity/change/20260820T0738569779880000/273573 properties ef:agent/opsin_iupac ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v14 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v15
ef:activity/change/20260820T0738569779880000/279933 properties ef:agent/rdkit_post_consensus ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v15 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v16
ef:activity/change/20260820T0738569779880000/291993 altLabel ef:agent/dedupe_altlabels ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v16 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v17
ef:activity/change/20260820T0738569779880000/294161 concept_associations ef:agent/carry_associations_onto_flows ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v17 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v18
ef:activity/change/20260820T0738569779880000/387852 properties ef:agent/normalise_property_values ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v18 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v19
ef:activity/change/20260820T0738569779880000/394360 types ef:agent/link_flows_to_their_substance ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v19 ef:flow/0072d30d-1054-4119-87a7-6f79fddf0ad2/v20

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