Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'Defol 750' (trade name)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=sodiumchlorate||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7775-09-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1a5c53eaddd1bf87: {'7775-09-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7775-09-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_65242']; candidate_pubchem_cids=[24487, 516902, 45051627]; selected_pubchem_cids=[516902]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
625 bootstrap_labels prefLabel [{"@value":"Sodium chlorate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Bootstrapped prefLabel from legacy name field
626 bootstrap_labels name Sodium chlorate Purged legacy name field to enforce prefLabel usage
26,326 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
26,327 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
213,548 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,246 normalize_name_case prefLabel [{"@value":"Sodium chlorate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… [{"@value":"Sodium Chlorate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,767 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,768 enrich_references skos_definition [{"@value":"An inorganic sodium salt that has chlorate as the counter-ion. An oxidising agent, it is used for bleaching… Merged ChEBI/PubChem definitions into skos:definition
227,769 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J44.034E","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['7775-09-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_65242']; candidate_pubchem_cids=[24487, 516902, 45051627]; selected_pubchem_cids=[516902]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,482 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… rdkit_pre_consensus from 'O=Cl(=O)[O-].[Na+]'; added: inchi2d_string, inchi2d_key_string, monoisotopic_mass
254,463 chebi_altlabels altLabel [] [{"@value":"Chlorate de sodium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,881 consensus_match altLabel [{"@value":"Chlorate de sodium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… [{"@value":"Chlorate de sodium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… group_key=sodiumchlorate||dimension=Environmental > media=Air > strata=Unknown; cas=7775-09-9; added Common Chemistry CAS names as altLabel: Agrosan, Asex, Atlacide, B-Herbatox, Chlorate SL, Chloric acid, sodium salt (1:1), Defol 5, Defol 750, Desolet, Evau-Super, Granex O, Kusa-tohru, Oxycil, Shed-A-Leaf, Sodakem, Sodium chlorate (NaClO<sub>3</sub>), Travex, VAL-DROP; object_uuid=fo-1a5c53eaddd1bf87
271,882 consensus_match cas_match_labels {"7775-09-9":"exactMatch"} group_key=sodiumchlorate||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7775-09-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1a5c53eaddd1bf87: {'7775-09-9': 'exactMatch'}
273,626 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Sodium Chlorate'
279,989 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… rdkit_post_consensus from '[Na+].[O-][Cl+2]([O-])[O-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
286,747 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
287,395 strip_catalogue_altlabels altLabel [{"@value":"Chlorate de sodium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… [{"@value":"Chlorate de sodium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… Removed 1 catalogue altLabel value(s): 'Defol 750' (trade name)
294,229 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/00a1aa9f-2693-… associations resolved on the elementary layer
387,902 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["ClNaO3","C… typed the way the ontology types it
394,436 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow
394,437 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/625 prefLabel ef:agent/bootstrap_labels ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v0 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v1
ef:activity/change/20260820T1555490862250000/626 name ef:agent/bootstrap_labels ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v1 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v2
ef:activity/change/20260820T1555490862250000/26326 context ef:agent/default_context_mapping ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v2 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v3
ef:activity/change/20260820T1555490862250000/26327 context_iri ef:agent/default_context_mapping ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v3 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v4
ef:activity/change/20260820T1555490862250000/213548 unit_iri ef:agent/unit_normalization ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v4 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v5
ef:activity/change/20260820T1555490862250000/221246 prefLabel ef:agent/normalize_name_case ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v5 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v6
ef:activity/change/20260820T1555490862250000/227767 properties ef:agent/enrich_references ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v6 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v7
ef:activity/change/20260820T1555490862250000/227768 skos_definition ef:agent/enrich_references ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v7 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v8
ef:activity/change/20260820T1555490862250000/227769 references ef:agent/enrich_references ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v8 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v9
ef:activity/change/20260820T1555490862250000/248482 properties ef:agent/rdkit_pre_consensus ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v9 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v10
ef:activity/change/20260820T1555490862250000/254463 altLabel ef:agent/chebi_altlabels ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v10 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v11
ef:activity/change/20260820T1555490862250000/271881 altLabel ef:agent/consensus_match ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v11 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v12
ef:activity/change/20260820T1555490862250000/271882 cas_match_labels ef:agent/consensus_match ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v12 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v13
ef:activity/change/20260820T1555490862250000/273626 properties ef:agent/opsin_iupac ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v13 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v14
ef:activity/change/20260820T1555490862250000/279989 properties ef:agent/rdkit_post_consensus ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v14 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v15
ef:activity/change/20260820T1555490862250000/286747 properties ef:agent/withhold_ambiguous_mass ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v15 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v16
ef:activity/change/20260820T1555490862250000/287395 altLabel ef:agent/strip_catalogue_altlabels ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v16 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v17
ef:activity/change/20260820T1555490862250000/294229 concept_associations ef:agent/carry_associations_onto_flows ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v17 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v18
ef:activity/change/20260820T1555490862250000/387902 properties ef:agent/normalise_property_values ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v18 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v19
ef:activity/change/20260820T1555490862250000/394436 types ef:agent/link_flows_to_their_substance ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v19 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v20
ef:activity/change/20260820T1555490862250000/394437 roles ef:agent/link_flows_to_their_substance ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v20 ef:flow/00a1aa9f-2693-4272-bf30-8f34704fcdb7/v21

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