Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, consensus_match cas=14073-97-3; cc_chebi_agreed_name='(-)-Menthone'; object_uuid=fo-fe29a99aabd86f4d
cas_match_labels 1 consensus_match group_key=(2s,5r)-5-methyl-2-propan-2-ylcyclohexan-1-one||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'14073-97-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fe29a99aabd86f4d: {'14073-97-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['14073-97-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15410']; candidate_pubchem_cids=[6986, 26447]; selected_pubchem_cids=[26447]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
775 bootstrap_labels prefLabel [{"@value":"(2s,5r)-5-methyl-2-propan-2-ylcyclohexan-1-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap… Bootstrapped prefLabel from legacy name field
776 bootstrap_labels name (2s,5r)-5-methyl-2-propan-2-ylcyclohexan-1-one Purged legacy name field to enforce prefLabel usage
777 bootstrap_labels synonyms ["organic","l-menthan-3-one"] [] Removed legacy synonyms field in favor of structured labels
26,434 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
26,435 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
213,599 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
227,919 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,920 enrich_references skos_definition [{"@value":"A menthone that is cyclohexanone substituted by a methyl and an isopropyl group at positions 5 and 2 respec… Merged ChEBI/PubChem definitions into skos:definition
227,921 enrich_references references [] [{"@id":"beilstein:2041368","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['14073-97-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15410']; candidate_pubchem_cids=[6986, 26447]; selected_pubchem_cids=[26447]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,530 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… rdkit_pre_consensus from 'CC(C)[C@@H]1CC[C@@H](C)CC1=O'; added: monoisotopic_mass
254,483 chebi_altlabels altLabel [] [{"@value":"(-)-Menthone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,698 consensus_match prefLabel [{"@value":"(2s,5r)-5-methyl-2-propan-2-ylcyclohexan-1-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap… [{"@value":"(-)-Menthone","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"co… cas=14073-97-3; cc_chebi_agreed_name='(-)-Menthone'; object_uuid=fo-fe29a99aabd86f4d
257,699 consensus_match altLabel [{"@value":"(-)-Menthone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"(1R,4S)-menthone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… cas=14073-97-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-fe29a99aabd86f4d
257,700 consensus_match altLabel [{"@value":"(1R,4S)-menthone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(1R,4S)-menthone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… group_key=(2s,5r)-5-methyl-2-propan-2-ylcyclohexan-1-one||dimension=Environmental > media=Water > water_body=Surface water; cas=14073-97-3; added Common Chemistry CAS names as altLabel: (-)-<span class="text-smallcaps">L</span>-Menthone, (1<em>R</em>,4<em>S</em>)-<em>p</em>-Menth-3-one, (2<em>S</em>,5<em>R</em>)-(-)-Menthone, (2<em>S</em>,5<em>R</em>)-2-Isopropyl-5-methylcyclohexan-1-one, <em>p</em>-Menthan-3-one, (1<em>R</em>,4<em>S</em>)-(-)-, <em>trans</em>-(-)-<em>p</em>-Menthan-3-one, Cyclohexanone, 5-methyl-2-(1-methylethyl)-, (2<em>S</em>,5<em>R</em>)-, Cyclohexanone, 5-methyl-2-(1-methylethyl)-, (2<em>S</em>-<em>trans</em>)-; object_uuid=fo-fe29a99aabd86f4d
257,701 consensus_match cas_match_labels {"14073-97-3":"exactMatch"} group_key=(2s,5r)-5-methyl-2-propan-2-ylcyclohexan-1-one||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'14073-97-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fe29a99aabd86f4d: {'14073-97-3': 'exactMatch'}
273,670 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(1R,4S)-p-menthan-3-one'
280,037 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… rdkit_post_consensus from 'CC(C)[C@@H]1CC[C@@H](C)CC1=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,013 dedupe_altlabels altLabel [{"@value":"(1R,4S)-menthone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(1R,4S)-menthone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Deduplicated altLabel values and removed entries matching prefLabel
294,281 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/00d93479-95a5-… associations resolved on the elementary layer
387,948 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… typed the way the ontology types it
394,495 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,496 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18O"],… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/775 prefLabel ef:agent/bootstrap_labels ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v0 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v1
ef:activity/change/20260820T0738569779880000/776 name ef:agent/bootstrap_labels ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v1 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v2
ef:activity/change/20260820T0738569779880000/777 synonyms ef:agent/bootstrap_labels ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v2 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v3
ef:activity/change/20260820T0738569779880000/26434 context ef:agent/default_context_mapping ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v3 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v4
ef:activity/change/20260820T0738569779880000/26435 context_iri ef:agent/default_context_mapping ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v4 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v5
ef:activity/change/20260820T0738569779880000/213599 unit_iri ef:agent/unit_normalization ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v5 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v6
ef:activity/change/20260820T0738569779880000/227919 properties ef:agent/enrich_references ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v6 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v7
ef:activity/change/20260820T0738569779880000/227920 skos_definition ef:agent/enrich_references ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v7 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v8
ef:activity/change/20260820T0738569779880000/227921 references ef:agent/enrich_references ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v8 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v9
ef:activity/change/20260820T0738569779880000/248530 properties ef:agent/rdkit_pre_consensus ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v9 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v10
ef:activity/change/20260820T0738569779880000/254483 altLabel ef:agent/chebi_altlabels ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v10 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v11
ef:activity/change/20260820T0738569779880000/257698 prefLabel ef:agent/consensus_match ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v11 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v12
ef:activity/change/20260820T0738569779880000/257699 altLabel ef:agent/consensus_match ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v12 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v13
ef:activity/change/20260820T0738569779880000/257700 altLabel ef:agent/consensus_match ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v13 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v14
ef:activity/change/20260820T0738569779880000/257701 cas_match_labels ef:agent/consensus_match ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v14 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v15
ef:activity/change/20260820T0738569779880000/273670 properties ef:agent/opsin_iupac ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v15 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v16
ef:activity/change/20260820T0738569779880000/280037 properties ef:agent/rdkit_post_consensus ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v16 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v17
ef:activity/change/20260820T0738569779880000/292013 altLabel ef:agent/dedupe_altlabels ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v17 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v18
ef:activity/change/20260820T0738569779880000/294281 concept_associations ef:agent/carry_associations_onto_flows ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v18 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v19
ef:activity/change/20260820T0738569779880000/387948 properties ef:agent/normalise_property_values ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v19 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v20
ef:activity/change/20260820T0738569779880000/394495 types ef:agent/link_flows_to_their_substance ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v20 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v21
ef:activity/change/20260820T0738569779880000/394496 properties ef:agent/link_flows_to_their_substance ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v21 ef:flow/00d93479-95a5-4e32-9086-6fde01a6622e/v22

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