Brightway Flows 1.0
GitHub

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 91464' (registry code)
cas_match_labels 1 consensus_match group_key=4-iodophenol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'540-38-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3598394b56dfef92: {'540-38-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['540-38-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_43521']; candidate_pubchem_cids=[10894]; selected_pubchem_cids=[10894]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
957 bootstrap_labels prefLabel — [{"@value":"4-iodophenol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"b… Bootstrapped prefLabel from legacy name field
958 bootstrap_labels name 4-iodophenol — Purged legacy name field to enforce prefLabel usage
959 bootstrap_labels synonyms ["4-iodophenol","4-Hydroxyiodobenzene","4-Hydroxyphenyl iodide","AC-5105","AC1L1W6E","AC1Q78VT","AKOS000120743","I0311"… [] Removed legacy synonyms field in favor of structured labels
26,557 default_context_mapping context — {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
26,558 default_context_mapping context_iri — https://vocab.brightway.one/flow-contexts/envi-air-aicrhe Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
213,657 unit_normalization unit_iri — https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
228,092 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,093 enrich_references skos_definition — [] Merged ChEBI/PubChem definitions into skos:definition
228,094 enrich_references references [] [{"@id":"beilstein:1904544","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['540-38-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_43521']; candidate_pubchem_cids=[10894]; selected_pubchem_cids=[10894]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,579 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… rdkit_pre_consensus from 'C1=CC(=CC=C1O)I'; added: monoisotopic_mass
254,503 chebi_altlabels altLabel [] [{"@value":"4-Jodphenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"bri… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
262,770 consensus_match altLabel [{"@value":"4-Jodphenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"bri… [{"@value":"4-Jodphenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"bri… group_key=4-iodophenol||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=540-38-5; added Common Chemistry CAS names as altLabel: 1-Iodo-4-hydroxybenzene, 4-Hydroxyiodobenzene, NSC 91464, Phenol, 4-iodo-, Phenol, <em>p</em>-iodo-; object_uuid=fo-3598394b56dfef92
262,771 consensus_match cas_match_labels — {"540-38-5":"exactMatch"} group_key=4-iodophenol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'540-38-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3598394b56dfef92: {'540-38-5': 'exactMatch'}
273,702 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '4-iodophenol'
280,078 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… rdkit_post_consensus from 'Oc1ccc(I)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,457 strip_catalogue_altlabels altLabel [{"@value":"4-Jodphenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"bri… [{"@value":"4-Jodphenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"bri… Removed 1 catalogue altLabel value(s): 'NSC 91464' (registry code)
294,358 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0112830f-c103-… associations resolved on the elementary layer
388,007 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5IO"],"… typed the way the ontology types it
394,573 link_flows_to_their_substance types — ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20261021T1801397624190000/957 prefLabel ef:agent/bootstrap_labels ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v0 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v1
ef:activity/change/20261021T1801397624190000/958 name ef:agent/bootstrap_labels ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v1 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v2
ef:activity/change/20261021T1801397624190000/959 synonyms ef:agent/bootstrap_labels ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v2 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v3
ef:activity/change/20261021T1801397624190000/26557 context ef:agent/default_context_mapping ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v3 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v4
ef:activity/change/20261021T1801397624190000/26558 context_iri ef:agent/default_context_mapping ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v4 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v5
ef:activity/change/20261021T1801397624190000/213657 unit_iri ef:agent/unit_normalization ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v5 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v6
ef:activity/change/20261021T1801397624190000/228092 properties ef:agent/enrich_references ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v6 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v7
ef:activity/change/20261021T1801397624190000/228093 skos_definition ef:agent/enrich_references ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v7 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v8
ef:activity/change/20261021T1801397624190000/228094 references ef:agent/enrich_references ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v8 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v9
ef:activity/change/20261021T1801397624190000/248579 properties ef:agent/rdkit_pre_consensus ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v9 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v10
ef:activity/change/20261021T1801397624190000/254503 altLabel ef:agent/chebi_altlabels ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v10 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v11
ef:activity/change/20261021T1801397624190000/262770 altLabel ef:agent/consensus_match ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v11 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v12
ef:activity/change/20261021T1801397624190000/262771 cas_match_labels ef:agent/consensus_match ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v12 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v13
ef:activity/change/20261021T1801397624190000/273702 properties ef:agent/opsin_iupac ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v13 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v14
ef:activity/change/20261021T1801397624190000/280078 properties ef:agent/rdkit_post_consensus ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v14 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v15
ef:activity/change/20261021T1801397624190000/287457 altLabel ef:agent/strip_catalogue_altlabels ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v15 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v16
ef:activity/change/20261021T1801397624190000/294358 concept_associations ef:agent/carry_associations_onto_flows ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v16 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v17
ef:activity/change/20261021T1801397624190000/388007 properties ef:agent/normalise_property_values ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v17 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v18
ef:activity/change/20261021T1801397624190000/394573 types ef:agent/link_flows_to_their_substance ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v18 ef:flow/0112830f-c103-4045-bcd8-f7699d27c357/v19

Keyboard

?
Show or hide this map
/
Focus search
Esc
Close