Pyrrole
Everything that changed this flow. Back to the flow
012345be-dfc4-4501-b6f3-f20a095fdd69
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 62777' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=pyrrole||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-97-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1412ec8f4abddb8f: {'109-97-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['109-97-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_19203']; candidate_pubchem_cids=[8027, 2737588]; selected_pubchem_cids=[8027]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,009 | bootstrap_labels | prefLabel | — | [{"@value":"pyrrole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 1,010 | bootstrap_labels | name | pyrrole | — | Purged legacy name field to enforce prefLabel usage |
| 1,011 | bootstrap_labels | synonyms | ["1-Aza-2,4-cyclopentadiene","1H-Pyrrole","1H-Pyrrole, homopolymer","1H-Pyrrole, potassium salt","AB1002244","AC1L1Q3I"… | [] | Removed legacy synonyms field in favor of structured labels |
| 26,596 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 26,597 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 213,677 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,335 | normalize_name_case | prefLabel | [{"@value":"pyrrole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Pyrrole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 228,147 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 228,148 | enrich_references | skos_definition | — | [{"@value":"A tautomer of pyrrole that has the double bonds at positions 2 and 4.","@language":"en","provenance":{"prov… | Merged ChEBI/PubChem definitions into skos:definition |
| 228,149 | enrich_references | references | [] | [{"@id":"beilstein:1159","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"co… | Added references with provenance; cas_numbers=['109-97-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_19203']; candidate_pubchem_cids=[8027, 2737588]; selected_pubchem_cids=[8027]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,598 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | rdkit_pre_consensus from 'C1=CNC=C1'; added: monoisotopic_mass |
| 254,513 | chebi_altlabels | altLabel | [] | [{"@value":"1-aza-2,4-cyclopentadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 271,266 | consensus_match | altLabel | [{"@value":"1-aza-2,4-cyclopentadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"1-aza-2,4-cyclopentadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | group_key=pyrrole||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=109-97-7; added Common Chemistry CAS names as altLabel: Azole, NSC 62777; object_uuid=fo-1412ec8f4abddb8f |
| 271,267 | consensus_match | cas_match_labels | — | {"109-97-7":"exactMatch"} | group_key=pyrrole||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-97-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1412ec8f4abddb8f: {'109-97-7': 'exactMatch'} |
| 273,737 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Pyrrole' |
| 280,112 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | rdkit_post_consensus from 'c1cc[nH]c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,478 | strip_catalogue_altlabels | altLabel | [{"@value":"1-aza-2,4-cyclopentadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"1-aza-2,4-cyclopentadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Removed 1 catalogue altLabel value(s): 'NSC 62777' (registry code) |
| 294,362 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/012345be-dfc4-… | associations resolved on the elementary layer |
| 388,017 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H5N"],"a… | typed the way the ontology types it |
| 394,589 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/1009 | prefLabel | ef:agent/bootstrap_labels | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v0 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v1 |
| ef:activity/change/20260820T0738569779880000/1010 | name | ef:agent/bootstrap_labels | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v1 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v2 |
| ef:activity/change/20260820T0738569779880000/1011 | synonyms | ef:agent/bootstrap_labels | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v2 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v3 |
| ef:activity/change/20260820T0738569779880000/26596 | context | ef:agent/default_context_mapping | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v3 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v4 |
| ef:activity/change/20260820T0738569779880000/26597 | context_iri | ef:agent/default_context_mapping | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v4 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v5 |
| ef:activity/change/20260820T0738569779880000/213677 | unit_iri | ef:agent/unit_normalization | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v5 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v6 |
| ef:activity/change/20260820T0738569779880000/221335 | prefLabel | ef:agent/normalize_name_case | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v6 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v7 |
| ef:activity/change/20260820T0738569779880000/228147 | properties | ef:agent/enrich_references | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v7 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v8 |
| ef:activity/change/20260820T0738569779880000/228148 | skos_definition | ef:agent/enrich_references | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v8 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v9 |
| ef:activity/change/20260820T0738569779880000/228149 | references | ef:agent/enrich_references | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v9 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v10 |
| ef:activity/change/20260820T0738569779880000/248598 | properties | ef:agent/rdkit_pre_consensus | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v10 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v11 |
| ef:activity/change/20260820T0738569779880000/254513 | altLabel | ef:agent/chebi_altlabels | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v11 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v12 |
| ef:activity/change/20260820T0738569779880000/271266 | altLabel | ef:agent/consensus_match | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v12 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v13 |
| ef:activity/change/20260820T0738569779880000/271267 | cas_match_labels | ef:agent/consensus_match | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v13 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v14 |
| ef:activity/change/20260820T0738569779880000/273737 | properties | ef:agent/opsin_iupac | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v14 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v15 |
| ef:activity/change/20260820T0738569779880000/280112 | properties | ef:agent/rdkit_post_consensus | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v15 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v16 |
| ef:activity/change/20260820T0738569779880000/287478 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v16 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v17 |
| ef:activity/change/20260820T0738569779880000/294362 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v17 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v18 |
| ef:activity/change/20260820T0738569779880000/388017 | properties | ef:agent/normalise_property_values | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v18 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v19 |
| ef:activity/change/20260820T0738569779880000/394589 | types | ef:agent/link_flows_to_their_substance | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v19 | ef:flow/012345be-dfc4-4501-b6f3-f20a095fdd69/v20 |