Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=n-(4-chlorobenzyl)cyclopentanamine||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['ec_inventory', 'pubchem']; cas_sources={'66063-15-8': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7c5514a7823345c9: {'66063-15-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['66063-15-8']; matched_chebi_ids=[]; candidate_pubchem_cids=[834083, 17174966]; selected_pubchem_cids=[834083]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
1,256 bootstrap_labels prefLabel [{"@value":"n-(4-chlorobenzyl)cyclopentanamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pr… Bootstrapped prefLabel from legacy name field
1,257 bootstrap_labels name n-(4-chlorobenzyl)cyclopentanamine Purged legacy name field to enforce prefLabel usage
1,258 bootstrap_labels synonyms ["organic","4-chloro-n-cyclopentylbenzylamine"] [] Removed legacy synonyms field in favor of structured labels
26,768 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
26,769 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
213,760 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,387 normalize_name_case prefLabel [{"@value":"n-(4-chlorobenzyl)cyclopentanamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pr… [{"@value":"N-(4-chlorobenzyl)cyclopentanamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pr… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,390 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
228,391 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
228,392 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J349.332F","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['66063-15-8']; matched_chebi_ids=[]; candidate_pubchem_cids=[834083, 17174966]; selected_pubchem_cids=[834083]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,671 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… rdkit_pre_consensus from 'C1CCC(C1)NCC2=CC=C(C=C2)Cl'; added: molecular_mass, monoisotopic_mass
269,378 consensus_match altLabel [] [{"@value":"4-Chloro-<em>N</em>-cyclopentylbenzenemethanamine","@language":"en","source":{"prov:wasGeneratedBy":"consen… group_key=n-(4-chlorobenzyl)cyclopentanamine||dimension=Environmental > media=Water > water_body=Ocean; cas=66063-15-8; added Common Chemistry CAS names as altLabel: 4-Chloro-<em>N</em>-cyclopentylbenzenemethanamine, <em>N</em>-(4-Chlorobenzyl)-<em>N</em>-cyclopentylamine, <em>p</em>-Chloro-<em>N</em>-cyclopentylbenzylamine, Benzenemethanamine, 4-chloro-<em>N</em>-cyclopentyl-; object_uuid=fo-7c5514a7823345c9
269,379 consensus_match cas_match_labels {"66063-15-8":"exactMatch"} group_key=n-(4-chlorobenzyl)cyclopentanamine||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['ec_inventory', 'pubchem']; cas_sources={'66063-15-8': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7c5514a7823345c9: {'66063-15-8': 'exactMatch'}
273,808 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'N-(4-chlorobenzyl)cyclopentanamine'
280,190 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… rdkit_post_consensus from 'Clc1ccc(CNC2CCCC2)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,042 dedupe_altlabels altLabel [{"@value":"4-Chloro-<em>N</em>-cyclopentylbenzenemethanamine","@language":"en","source":{"prov:wasGeneratedBy":"consen… [{"@value":"4-Chloro-N-cyclopentylbenzenemethanamine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match… Deduplicated altLabel values and removed entries matching prefLabel
294,450 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/01772784-3a27-… associations resolved on the elementary layer
388,091 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16ClN"… typed the way the ontology types it
394,688 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/1256 prefLabel ef:agent/bootstrap_labels ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v0 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v1
ef:activity/change/20260820T1555490862250000/1257 name ef:agent/bootstrap_labels ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v1 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v2
ef:activity/change/20260820T1555490862250000/1258 synonyms ef:agent/bootstrap_labels ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v2 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v3
ef:activity/change/20260820T1555490862250000/26768 context ef:agent/default_context_mapping ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v3 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v4
ef:activity/change/20260820T1555490862250000/26769 context_iri ef:agent/default_context_mapping ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v4 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v5
ef:activity/change/20260820T1555490862250000/213760 unit_iri ef:agent/unit_normalization ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v5 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v6
ef:activity/change/20260820T1555490862250000/221387 prefLabel ef:agent/normalize_name_case ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v6 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v7
ef:activity/change/20260820T1555490862250000/228390 properties ef:agent/enrich_references ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v7 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v8
ef:activity/change/20260820T1555490862250000/228391 skos_definition ef:agent/enrich_references ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v8 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v9
ef:activity/change/20260820T1555490862250000/228392 references ef:agent/enrich_references ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v9 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v10
ef:activity/change/20260820T1555490862250000/248671 properties ef:agent/rdkit_pre_consensus ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v10 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v11
ef:activity/change/20260820T1555490862250000/269378 altLabel ef:agent/consensus_match ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v11 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v12
ef:activity/change/20260820T1555490862250000/269379 cas_match_labels ef:agent/consensus_match ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v12 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v13
ef:activity/change/20260820T1555490862250000/273808 properties ef:agent/opsin_iupac ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v13 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v14
ef:activity/change/20260820T1555490862250000/280190 properties ef:agent/rdkit_post_consensus ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v14 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v15
ef:activity/change/20260820T1555490862250000/292042 altLabel ef:agent/dedupe_altlabels ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v15 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v16
ef:activity/change/20260820T1555490862250000/294450 concept_associations ef:agent/carry_associations_onto_flows ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v16 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v17
ef:activity/change/20260820T1555490862250000/388091 properties ef:agent/normalise_property_values ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v17 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v18
ef:activity/change/20260820T1555490862250000/394688 types ef:agent/link_flows_to_their_substance ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v18 ef:flow/01772784-3a27-47ba-99e7-360920b345c0/v19

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