Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 7300' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=625-45-6; cc_chebi_agreed_name='Methoxyacetic acid'; object_uuid=fo-8317d798b76ff4e7
cas_match_labels 1 consensus_match group_key=2-methoxyaceticacid/n||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'625-45-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8317d798b76ff4e7: {'625-45-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['625-45-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_132098']; candidate_pubchem_cids=[12251, 109013, 161333]; selected_pubchem_cids=[12251]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
1,571 bootstrap_labels prefLabel [{"@value":"2-methoxyacetic acid/n","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Bootstrapped prefLabel from legacy name field
1,572 bootstrap_labels name 2-methoxyacetic acid/n Purged legacy name field to enforce prefLabel usage
1,573 bootstrap_labels synonyms ["organic","methoxyaceticacid","2-methoxyaceticacid","aceticacid,methoxy-(6ci,7ci,8ci,9ci)","methoxyessigsã¤ure","metho… [] Removed legacy synonyms field in favor of structured labels
26,994 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
26,995 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
213,867 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,459 normalize_name_case prefLabel [{"@value":"2-methoxyacetic acid/n","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… [{"@value":"2-methoxyacetic Acid/n","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,698 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,699 enrich_references skos_definition [{"@value":"A monocarboxylic acid that is acetic acid in which one of the methyl hydrogens is replaced by a methoxy gro… Merged ChEBI/PubChem definitions into skos:definition
228,700 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J502I","provenance":{"prov:wasGeneratedBy":"enrich_references.… Added references with provenance; cas_numbers=['625-45-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_132098']; candidate_pubchem_cids=[12251, 109013, 161333]; selected_pubchem_cids=[12251]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,759 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… rdkit_pre_consensus from 'COCC(=O)O'; added: monoisotopic_mass
254,569 chebi_altlabels altLabel [] [{"@value":"2-Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
261,028 consensus_match prefLabel [{"@value":"2-methoxyacetic Acid/n","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… [{"@value":"Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedT… cas=625-45-6; cc_chebi_agreed_name='Methoxyacetic acid'; object_uuid=fo-8317d798b76ff4e7
261,029 consensus_match altLabel [{"@value":"2-Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… [{"@value":"2-Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… cas=625-45-6; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-8317d798b76ff4e7
261,030 consensus_match altLabel [{"@value":"2-Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… [{"@value":"2-Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… group_key=2-methoxyaceticacid/n||dimension=Environmental > media=Ground > geography=Agricultural; cas=625-45-6; added Common Chemistry CAS names as altLabel: Acetic acid, 2-methoxy-, Acetic acid, methoxy-, NSC 7300; object_uuid=fo-8317d798b76ff4e7
261,031 consensus_match cas_match_labels {"625-45-6":"exactMatch"} group_key=2-methoxyaceticacid/n||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'625-45-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8317d798b76ff4e7: {'625-45-6': 'exactMatch'}
273,896 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methoxyacetic acid'
280,286 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… rdkit_post_consensus from 'COCC(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,590 strip_catalogue_altlabels altLabel [{"@value":"2-Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… [{"@value":"2-Methoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… Removed 1 catalogue altLabel value(s): 'NSC 7300' (registry code)
294,561 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/01defab8-1927-… associations resolved on the elementary layer
388,185 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O3"],"… typed the way the ontology types it
394,806 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/1571 prefLabel ef:agent/bootstrap_labels ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v0 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v1
ef:activity/change/20260820T1416470405690000/1572 name ef:agent/bootstrap_labels ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v1 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v2
ef:activity/change/20260820T1416470405690000/1573 synonyms ef:agent/bootstrap_labels ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v2 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v3
ef:activity/change/20260820T1416470405690000/26994 context ef:agent/default_context_mapping ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v3 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v4
ef:activity/change/20260820T1416470405690000/26995 context_iri ef:agent/default_context_mapping ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v4 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v5
ef:activity/change/20260820T1416470405690000/213867 unit_iri ef:agent/unit_normalization ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v5 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v6
ef:activity/change/20260820T1416470405690000/221459 prefLabel ef:agent/normalize_name_case ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v6 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v7
ef:activity/change/20260820T1416470405690000/228698 properties ef:agent/enrich_references ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v7 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v8
ef:activity/change/20260820T1416470405690000/228699 skos_definition ef:agent/enrich_references ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v8 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v9
ef:activity/change/20260820T1416470405690000/228700 references ef:agent/enrich_references ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v9 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v10
ef:activity/change/20260820T1416470405690000/248759 properties ef:agent/rdkit_pre_consensus ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v10 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v11
ef:activity/change/20260820T1416470405690000/254569 altLabel ef:agent/chebi_altlabels ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v11 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v12
ef:activity/change/20260820T1416470405690000/261028 prefLabel ef:agent/consensus_match ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v12 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v13
ef:activity/change/20260820T1416470405690000/261029 altLabel ef:agent/consensus_match ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v13 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v14
ef:activity/change/20260820T1416470405690000/261030 altLabel ef:agent/consensus_match ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v14 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v15
ef:activity/change/20260820T1416470405690000/261031 cas_match_labels ef:agent/consensus_match ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v15 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v16
ef:activity/change/20260820T1416470405690000/273896 properties ef:agent/opsin_iupac ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v16 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v17
ef:activity/change/20260820T1416470405690000/280286 properties ef:agent/rdkit_post_consensus ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v17 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v18
ef:activity/change/20260820T1416470405690000/287590 altLabel ef:agent/strip_catalogue_altlabels ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v18 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v19
ef:activity/change/20260820T1416470405690000/294561 concept_associations ef:agent/carry_associations_onto_flows ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v19 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v20
ef:activity/change/20260820T1416470405690000/388185 properties ef:agent/normalise_property_values ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v20 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v21
ef:activity/change/20260820T1416470405690000/394806 types ef:agent/link_flows_to_their_substance ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v21 ef:flow/01defab8-1927-4830-bfdd-593e40c8acdb/v22

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