Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=n-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide||dimension=Environmental > media=Water > water_body=Ocean; group_sources=[]; cas_sources={'115241-16-2': []}; assigned CAS labels from group consensus; object_uuid=fo-52fc46383f845289: {'115241-16-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['115241-16-2']; matched_chebi_ids=[]; candidate_pubchem_cids=[13983927, 22841505]; selected_pubchem_cids=[22841505]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
1,588 bootstrap_labels prefLabel [{"@value":"n-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide","@language":"en","source":{"prov:wasGeneratedBy":"… Bootstrapped prefLabel from legacy name field
1,589 bootstrap_labels name n-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide Purged legacy name field to enforce prefLabel usage
1,590 bootstrap_labels synonyms ["organic","l-sorbose,6-deoxy-6-(formylamino)-"] [] Removed legacy synonyms field in favor of structured labels
27,006 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
27,007 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
213,873 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,464 normalize_name_case prefLabel [{"@value":"n-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide","@language":"en","source":{"prov:wasGeneratedBy":"… [{"@value":"N-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide","@language":"en","source":{"prov:wasGeneratedBy":"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,715 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
228,716 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
228,717 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.115.101","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['115241-16-2']; matched_chebi_ids=[]; candidate_pubchem_cids=[13983927, 22841505]; selected_pubchem_cids=[22841505]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,764 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… rdkit_pre_consensus from 'C(C(C(C(C(=O)CO)O)O)O)NC=O'; added: inchi2d_string, molecular_mass, monoisotopic_mass
269,436 consensus_match altLabel [] [{"@value":"6-Deoxy-6-(formylamino)-<span class=\"text-smallcaps\">L</span>-sorbose","@language":"en","source":{"prov:w… group_key=n-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide||dimension=Environmental > media=Water > water_body=Ocean; cas=115241-16-2; added Common Chemistry CAS names as altLabel: 6-Deoxy-6-(formylamino)-<span class="text-smallcaps">L</span>-sorbose, <span class="text-smallcaps">L</span>-Sorbose, 6-deoxy-6-(formylamino)-; object_uuid=fo-52fc46383f845289
269,437 consensus_match cas_match_labels {"115241-16-2":"exactMatch"} group_key=n-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide||dimension=Environmental > media=Water > water_body=Ocean; group_sources=[]; cas_sources={'115241-16-2': []}; assigned CAS labels from group consensus; object_uuid=fo-52fc46383f845289: {'115241-16-2': 'exactMatch'}
273,903 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'N-[(2s,3r,4s)-2,3,4,6-tetrahydroxy-5-oxohexyl]formamide'
280,293 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… rdkit_post_consensus from 'O=CNC[C@H](O)[C@@H](O)[C@H](O)C(=O)CO'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,066 dedupe_altlabels altLabel [{"@value":"6-Deoxy-6-(formylamino)-<span class=\"text-smallcaps\">L</span>-sorbose","@language":"en","source":{"prov:w… [{"@value":"6-Deoxy-6-(formylamino)-L-sorbose","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov… Deduplicated altLabel values and removed entries matching prefLabel
294,569 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/01e7b861-6190-… associations resolved on the elementary layer
388,192 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… typed the way the ontology types it
394,814 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,815 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13NO6"]… the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/1588 prefLabel ef:agent/bootstrap_labels ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v0 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v1
ef:activity/change/20260820T1555490862250000/1589 name ef:agent/bootstrap_labels ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v1 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v2
ef:activity/change/20260820T1555490862250000/1590 synonyms ef:agent/bootstrap_labels ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v2 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v3
ef:activity/change/20260820T1555490862250000/27006 context ef:agent/default_context_mapping ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v3 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v4
ef:activity/change/20260820T1555490862250000/27007 context_iri ef:agent/default_context_mapping ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v4 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v5
ef:activity/change/20260820T1555490862250000/213873 unit_iri ef:agent/unit_normalization ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v5 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v6
ef:activity/change/20260820T1555490862250000/221464 prefLabel ef:agent/normalize_name_case ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v6 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v7
ef:activity/change/20260820T1555490862250000/228715 properties ef:agent/enrich_references ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v7 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v8
ef:activity/change/20260820T1555490862250000/228716 skos_definition ef:agent/enrich_references ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v8 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v9
ef:activity/change/20260820T1555490862250000/228717 references ef:agent/enrich_references ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v9 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v10
ef:activity/change/20260820T1555490862250000/248764 properties ef:agent/rdkit_pre_consensus ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v10 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v11
ef:activity/change/20260820T1555490862250000/269436 altLabel ef:agent/consensus_match ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v11 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v12
ef:activity/change/20260820T1555490862250000/269437 cas_match_labels ef:agent/consensus_match ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v12 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v13
ef:activity/change/20260820T1555490862250000/273903 properties ef:agent/opsin_iupac ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v13 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v14
ef:activity/change/20260820T1555490862250000/280293 properties ef:agent/rdkit_post_consensus ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v14 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v15
ef:activity/change/20260820T1555490862250000/292066 altLabel ef:agent/dedupe_altlabels ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v15 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v16
ef:activity/change/20260820T1555490862250000/294569 concept_associations ef:agent/carry_associations_onto_flows ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v16 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v17
ef:activity/change/20260820T1555490862250000/388192 properties ef:agent/normalise_property_values ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v17 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v18
ef:activity/change/20260820T1555490862250000/394814 types ef:agent/link_flows_to_their_substance ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v18 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v19
ef:activity/change/20260820T1555490862250000/394815 properties ef:agent/link_flows_to_their_substance ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v19 ef:flow/01e7b861-6190-4047-95d8-11df79e6a6a0/v20

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