Glutamic Acid
Everything that changed this flow. Back to the flow
02c28254-b0df-43fa-adf0-cf05918a3d1a
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'E 620' (grade code), 'NSC 143503' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=glutamicacid||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56-86-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fa0aa38bb52eeb73: {'56-86-0': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['56-86-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16015']; candidate_pubchem_cids=[611, 23327, 33032, 5460299, 21337768]; selected_pubchem_cids=[33032]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 2,265 | bootstrap_labels | prefLabel | — | [{"@value":"glutamic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Bootstrapped prefLabel from legacy name field |
| 2,266 | bootstrap_labels | name | glutamic acid | — | Purged legacy name field to enforce prefLabel usage |
| 2,267 | bootstrap_labels | synonyms | ["organic","glutamicacid","1–","aminopropane–","1,3–","dicarboxylicacid","1-aminopropane-1,3-dicarbox… | [] | Removed legacy synonyms field in favor of structured labels |
| 27,512 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 27,513 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 214,100 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,616 | normalize_name_case | prefLabel | [{"@value":"glutamic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | [{"@value":"Glutamic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 229,366 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 229,367 | enrich_references | skos_definition | — | [{"@value":"An optically active form of glutamic acid having L-configuration.","@language":"en","provenance":{"prov:was… | Merged ChEBI/PubChem definitions into skos:definition |
| 229,368 | enrich_references | references | [] | [{"@id":"bpdb:2297","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consens… | Added references with provenance; cas_numbers=['56-86-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16015']; candidate_pubchem_cids=[611, 23327, 33032, 5460299, 21337768]; selected_pubchem_cids=[33032]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,955 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | rdkit_pre_consensus from 'C(CC(=O)O)C(C(=O)O)N'; added: inchi2d_string, monoisotopic_mass |
| 254,638 | chebi_altlabels | altLabel | [] | [{"@value":"(2S)-2-aminopentanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… | Added 14 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,430 | consensus_match | altLabel | [{"@value":"(2S)-2-aminopentanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… | [{"@value":"(2S)-2-aminopentanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… | group_key=glutamicacid||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=56-86-0; added Common Chemistry CAS names as altLabel: (+)-<span class="text-smallcaps">L</span>-Glutamic acid, (2S)-2-Azaniumyl-5-hydroxy-5-oxopentanoate, (<em>S</em>)-(+)-Glutamic acid, (<em>S</em>)-2-Amino-1,5-pentanedioic acid, 1-Aminopropane-1,3-dicarboxylic acid, 2-Aminoglutaric acid, 6: PN: CN120157754 SEQID: 177 protein, 6: PN: WO2025124489 SEQID: 177 protein, 9: PN: WO2023056433 PAGE: 60 claimed sequence, <span class="text-smallcaps">L</span>-(+)-Glutamic acid, <span class="text-smallcaps">L</span>-α-Aminoglutaric acid, Aciglut, E 620, Glusate, Glutacid, Glutamic acid, <span class="text-smallcaps">L</span>-, Glutamicol, Glutamidex, Glutaminic acid, Glutaminol, Glutaton, MeSH ID: D018698, NSC 143503, Pentanedioic acid, 2-amino-, (<em>S</em>)-, Sortem, α-Aminoglutaric acid, α-Glutamic acid; object_uuid=fo-fa0aa38bb52eeb73 |
| 267,431 | consensus_match | cas_match_labels | — | {"56-86-0":"exactMatch"} | group_key=glutamicacid||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56-86-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fa0aa38bb52eeb73: {'56-86-0': 'exactMatch'} |
| 274,088 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Glutamic Acid' |
| 280,496 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | rdkit_post_consensus from 'N[C@@H](CCC(=O)O)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,719 | strip_catalogue_altlabels | altLabel | [{"@value":"(2S)-2-aminopentanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… | [{"@value":"(2S)-2-aminopentanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… | Removed 2 catalogue altLabel value(s): 'E 620' (grade code), 'NSC 143503' (registry code) |
| 294,820 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/02c28254-b0df-… | associations resolved on the elementary layer |
| 388,379 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | typed the way the ontology types it |
| 395,079 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 395,080 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H9NO4"],… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/2265 | prefLabel | ef:agent/bootstrap_labels | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v0 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v1 |
| ef:activity/change/20260820T0738569779880000/2266 | name | ef:agent/bootstrap_labels | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v1 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v2 |
| ef:activity/change/20260820T0738569779880000/2267 | synonyms | ef:agent/bootstrap_labels | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v2 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v3 |
| ef:activity/change/20260820T0738569779880000/27512 | context | ef:agent/default_context_mapping | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v3 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v4 |
| ef:activity/change/20260820T0738569779880000/27513 | context_iri | ef:agent/default_context_mapping | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v4 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v5 |
| ef:activity/change/20260820T0738569779880000/214100 | unit_iri | ef:agent/unit_normalization | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v5 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v6 |
| ef:activity/change/20260820T0738569779880000/221616 | prefLabel | ef:agent/normalize_name_case | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v6 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v7 |
| ef:activity/change/20260820T0738569779880000/229366 | properties | ef:agent/enrich_references | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v7 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v8 |
| ef:activity/change/20260820T0738569779880000/229367 | skos_definition | ef:agent/enrich_references | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v8 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v9 |
| ef:activity/change/20260820T0738569779880000/229368 | references | ef:agent/enrich_references | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v9 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v10 |
| ef:activity/change/20260820T0738569779880000/248955 | properties | ef:agent/rdkit_pre_consensus | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v10 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v11 |
| ef:activity/change/20260820T0738569779880000/254638 | altLabel | ef:agent/chebi_altlabels | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v11 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v12 |
| ef:activity/change/20260820T0738569779880000/267430 | altLabel | ef:agent/consensus_match | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v12 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v13 |
| ef:activity/change/20260820T0738569779880000/267431 | cas_match_labels | ef:agent/consensus_match | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v13 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v14 |
| ef:activity/change/20260820T0738569779880000/274088 | properties | ef:agent/opsin_iupac | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v14 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v15 |
| ef:activity/change/20260820T0738569779880000/280496 | properties | ef:agent/rdkit_post_consensus | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v15 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v16 |
| ef:activity/change/20260820T0738569779880000/287719 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v16 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v17 |
| ef:activity/change/20260820T0738569779880000/294820 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v17 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v18 |
| ef:activity/change/20260820T0738569779880000/388379 | properties | ef:agent/normalise_property_values | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v18 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v19 |
| ef:activity/change/20260820T0738569779880000/395079 | types | ef:agent/link_flows_to_their_substance | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v19 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v20 |
| ef:activity/change/20260820T0738569779880000/395080 | properties | ef:agent/link_flows_to_their_substance | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v20 | ef:flow/02c28254-b0df-43fa-adf0-cf05918a3d1a/v21 |