Consensus flow list

By field

12 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=24203-36-9; cc_chebi_agreed_name='Potassium(1+)'; object_uuid=fo-3415188c983fe425
cas_match_labels 1 consensus_match group_key=potassium,ion||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi']; cas_sources={'24203-36-9': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-3415188c983fe425: {'24203-36-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['24203-36-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29103']; candidate_pubchem_cids=[813, 44472433]; selected_pubchem_cids=[813]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
2,968 bootstrap_labels prefLabel [{"@value":"Potassium, ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Bootstrapped prefLabel from legacy name field
2,969 bootstrap_labels name Potassium, ion Purged legacy name field to enforce prefLabel usage
28,042 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
28,043 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
214,335 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,774 normalize_name_case prefLabel [{"@value":"Potassium, ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… [{"@value":"Potassium, Ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,038 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,039 enrich_references skos_definition [{"@value":"A monoatomic monocation obtained from potassium.","@language":"en","provenance":{"prov:wasGeneratedBy":"enr… Merged ChEBI/PubChem definitions into skos:definition
230,040 enrich_references references [] [{"@id":"gmelin:15203","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['24203-36-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29103']; candidate_pubchem_cids=[813, 44472433]; selected_pubchem_cids=[813]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,146 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… rdkit_pre_consensus from '[K+]'; added: monoisotopic_mass
254,721 chebi_altlabels altLabel [] [{"@value":"K(+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,952 consensus_match prefLabel [{"@value":"Potassium, Ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… [{"@value":"Potassium(1+)","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"c… cas=24203-36-9; cc_chebi_agreed_name='Potassium(1+)'; object_uuid=fo-3415188c983fe425
270,953 consensus_match altLabel [{"@value":"K(+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"K(+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… cas=24203-36-9; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-3415188c983fe425
270,954 consensus_match altLabel [{"@value":"K(+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"K(+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=potassium,ion||dimension=Environmental > media=Water > water_body=Long-term; cas=24203-36-9; added Common Chemistry CAS names as altLabel: K<sup>1+</sup>, Potassium (K<sup>+</sup>), Potassium ion (K<sup>+</sup>), Potassium ion(1+), Potassium monocation, Potassium, ion (K<sup>1+</sup>); object_uuid=fo-3415188c983fe425
270,955 consensus_match cas_match_labels {"24203-36-9":"exactMatch"} group_key=potassium,ion||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi']; cas_sources={'24203-36-9': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-3415188c983fe425: {'24203-36-9': 'exactMatch'}
274,278 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Potassium(1+)'
280,703 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… rdkit_post_consensus from '[K+]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,164 dedupe_altlabels altLabel [{"@value":"K(+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"K(+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Deduplicated altLabel values and removed entries matching prefLabel
295,085 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/03ac80dc-56fa-… associations resolved on the elementary layer
388,573 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… typed the way the ontology types it
395,356 link_flows_to_their_substance types ["https://w3id.org/chemrof/AtomCation"] the substance's answer, copied onto its flow
395,357 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["K","K+"],"… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/2968 prefLabel ef:agent/bootstrap_labels ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v0 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v1
ef:activity/change/20260820T0738569779880000/2969 name ef:agent/bootstrap_labels ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v1 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v2
ef:activity/change/20260820T0738569779880000/28042 context ef:agent/default_context_mapping ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v2 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v3
ef:activity/change/20260820T0738569779880000/28043 context_iri ef:agent/default_context_mapping ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v3 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v4
ef:activity/change/20260820T0738569779880000/214335 unit_iri ef:agent/unit_normalization ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v4 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v5
ef:activity/change/20260820T0738569779880000/221774 prefLabel ef:agent/normalize_name_case ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v5 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v6
ef:activity/change/20260820T0738569779880000/230038 properties ef:agent/enrich_references ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v6 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v7
ef:activity/change/20260820T0738569779880000/230039 skos_definition ef:agent/enrich_references ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v7 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v8
ef:activity/change/20260820T0738569779880000/230040 references ef:agent/enrich_references ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v8 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v9
ef:activity/change/20260820T0738569779880000/249146 properties ef:agent/rdkit_pre_consensus ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v9 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v10
ef:activity/change/20260820T0738569779880000/254721 altLabel ef:agent/chebi_altlabels ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v10 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v11
ef:activity/change/20260820T0738569779880000/270952 prefLabel ef:agent/consensus_match ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v11 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v12
ef:activity/change/20260820T0738569779880000/270953 altLabel ef:agent/consensus_match ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v12 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v13
ef:activity/change/20260820T0738569779880000/270954 altLabel ef:agent/consensus_match ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v13 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v14
ef:activity/change/20260820T0738569779880000/270955 cas_match_labels ef:agent/consensus_match ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v14 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v15
ef:activity/change/20260820T0738569779880000/274278 properties ef:agent/opsin_iupac ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v15 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v16
ef:activity/change/20260820T0738569779880000/280703 properties ef:agent/rdkit_post_consensus ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v16 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v17
ef:activity/change/20260820T0738569779880000/292164 altLabel ef:agent/dedupe_altlabels ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v17 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v18
ef:activity/change/20260820T0738569779880000/295085 concept_associations ef:agent/carry_associations_onto_flows ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v18 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v19
ef:activity/change/20260820T0738569779880000/388573 properties ef:agent/normalise_property_values ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v19 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v20
ef:activity/change/20260820T0738569779880000/395356 types ef:agent/link_flows_to_their_substance ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v20 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v21
ef:activity/change/20260820T0738569779880000/395357 properties ef:agent/link_flows_to_their_substance ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v21 ef:flow/03ac80dc-56fa-487a-9a0e-ea1f6107ab00/v22

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