Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 143490' (registry code)
cas_match_labels 1 consensus_match group_key=halothane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'151-67-7': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-5f0dbc95ba6533c9: {'151-67-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['151-67-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_5615']; candidate_pubchem_cids=[3562, 445258]; selected_pubchem_cids=[3562]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
3,497 bootstrap_labels prefLabel [{"@value":"Halothane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
3,498 bootstrap_labels name Halothane Purged legacy name field to enforce prefLabel usage
3,499 bootstrap_labels synonyms ["(+-)-2-Bromo-2-chloro-1,1,1-trifluoroethane","1,1,1-Trifluoro-2-bromo-2-chloroethane","1,1,1-Trifluoro-2-chloro-2-bro… [] Removed legacy synonyms field in favor of structured labels
28,676 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
28,677 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
214,506 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
230,552 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,553 enrich_references skos_definition [{"@value":"A haloalkane comprising ethane having three flouro substituents at the 1-position as well as bromo- and chl… Merged ChEBI/PubChem definitions into skos:definition
230,554 enrich_references references [] [{"@id":"beilstein:1736947","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['151-67-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_5615']; candidate_pubchem_cids=[3562, 445258]; selected_pubchem_cids=[3562]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,295 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… rdkit_pre_consensus from 'C(C(F)(F)F)(Cl)Br'; added: monoisotopic_mass
254,809 chebi_altlabels altLabel [{"@value":"Halon-2311","@language":"en","source":{"prov:wasGeneratedBy":"manual_fixes","prov:wasAttributedTo":"consens… [{"@value":"Halon-2311","@language":"en","source":{"prov:wasGeneratedBy":"manual_fixes","prov:wasAttributedTo":"consens… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,497 consensus_match altLabel [{"@value":"Halon-2311","@language":"en","source":{"prov:wasGeneratedBy":"manual_fixes","prov:wasAttributedTo":"consens… [{"@value":"Halon-2311","@language":"en","source":{"prov:wasGeneratedBy":"manual_fixes","prov:wasAttributedTo":"consens… group_key=halothane||dimension=Environmental > media=Ground > geography=Agricultural; cas=151-67-7; added Common Chemistry CAS names as altLabel: (±)-Halothane, 1-Chloro-1-bromo-2,2,2-trifluoroethane, 2-Chloro-2-bromo-1,1,1-trifluoroethane, Alotano, Anestan, Ethane, 2-bromo-2-chloro-1,1,1-trifluoro-, Fluktan, Freon 123B1, Ftorotan, Halan, Halothane-Vet, Halsan, MeSH ID: D006221, NSC 143490, Narcotan, Narkotan, R 123B1; object_uuid=fo-5f0dbc95ba6533c9
267,499 consensus_match cas_match_labels {"151-67-7":"exactMatch"} group_key=halothane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'151-67-7': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-5f0dbc95ba6533c9: {'151-67-7': 'exactMatch'}
274,417 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Halothane'
280,853 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… rdkit_post_consensus from 'FC(F)(F)C(Cl)Br'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,969 strip_catalogue_altlabels altLabel [{"@value":"Halon-2311","@language":"en","source":{"prov:wasGeneratedBy":"manual_fixes","prov:wasAttributedTo":"consens… [{"@value":"Halon-2311","@language":"en","source":{"prov:wasGeneratedBy":"manual_fixes","prov:wasAttributedTo":"consens… Removed 1 catalogue altLabel value(s): 'NSC 143490' (registry code)
295,382 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/041fd236-6556-… associations resolved on the elementary layer
388,711 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HBrClF3"… typed the way the ontology types it
395,555 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/3497 prefLabel ef:agent/bootstrap_labels ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260822T0600486828500000/3498 name ef:agent/bootstrap_labels ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260822T0600486828500000/3499 synonyms ef:agent/bootstrap_labels ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260822T0600486828500000/28676 context ef:agent/default_context_mapping ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260822T0600486828500000/28677 context_iri ef:agent/default_context_mapping ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260822T0600486828500000/214506 unit_iri ef:agent/unit_normalization ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260822T0600486828500000/230552 properties ef:agent/enrich_references ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260822T0600486828500000/230553 skos_definition ef:agent/enrich_references ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260822T0600486828500000/230554 references ef:agent/enrich_references ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260822T0600486828500000/249295 properties ef:agent/rdkit_pre_consensus ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260822T0600486828500000/254809 altLabel ef:agent/chebi_altlabels ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260822T0600486828500000/267497 altLabel ef:agent/consensus_match ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260822T0600486828500000/267499 cas_match_labels ef:agent/consensus_match ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260822T0600486828500000/274417 properties ef:agent/opsin_iupac ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260822T0600486828500000/280853 properties ef:agent/rdkit_post_consensus ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260822T0600486828500000/287969 altLabel ef:agent/strip_catalogue_altlabels ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260822T0600486828500000/295382 concept_associations ef:agent/carry_associations_onto_flows ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260822T0600486828500000/388711 properties ef:agent/normalise_property_values ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260822T0600486828500000/395555 types ef:agent/link_flows_to_their_substance ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/041fd236-6556-11dd-ad8b-0800200c9a66/v19

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