Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'CB 47' (grade code)
cas_match_labels 1 consensus_match group_key=2,2',4,4'-tetrachlorobiphenyl||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2437-79-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-37b0d5847f35cbed: {'2437-79-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['2437-79-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34204']; candidate_pubchem_cids=[17097, 53412432]; selected_pubchem_cids=[17097]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
5,884 bootstrap_labels prefLabel [{"@value":"2,2',4,4'-tetrachlorobiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wa… Bootstrapped prefLabel from legacy name field
5,885 bootstrap_labels name 2,2',4,4'-tetrachlorobiphenyl Purged legacy name field to enforce prefLabel usage
5,886 bootstrap_labels synonyms ["1,1'-Biphenyl, 2,2',4,4'-tetrachloro-","2,2',4,4'-TeCB","2,2',4,4'-Tetrachloro-1,1'-biphenyl","2,2',4,4'-Tetrachlorod… [] Removed legacy synonyms field in favor of structured labels
31,088 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
31,089 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
215,305 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
232,839 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
232,840 enrich_references skos_definition [{"@value":"A tetrachlorobiphenyl that is biphenyl in which each of the phenyl groups is substituted at positions 2 and… Merged ChEBI/PubChem definitions into skos:definition
232,841 enrich_references references [] [{"@id":"beilstein:2052543","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['2437-79-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34204']; candidate_pubchem_cids=[17097, 53412432]; selected_pubchem_cids=[17097]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,945 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… rdkit_pre_consensus from 'C1=CC(=C(C=C1Cl)Cl)C2=C(C=C(C=C2)Cl)Cl'; added: monoisotopic_mass
255,117 chebi_altlabels altLabel [] [{"@value":"1,1'-Biphenyl, 2,2',4,4'-tetrachloro-","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,427 consensus_match altLabel [{"@value":"1,1'-Biphenyl, 2,2',4,4'-tetrachloro-","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… [{"@value":"1,1'-Biphenyl, 2,2',4,4'-tetrachloro-","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… group_key=2,2',4,4'-tetrachlorobiphenyl||dimension=Environmental > media=Ground > geography=Agricultural; cas=2437-79-8; added Common Chemistry CAS names as altLabel: 1,1′-Biphenyl, 2,2′,4,4′-tetrachloro-, 2,2′,4,4′-Tetrachloro-1,1′-biphenyl, 2,2′,4,4′-Tetrachlorobiphenyl, 2,2′,4,4′-Tetrachlorodiphenyl, Biphenyl, 2,2′,4,4′-tetrachloro-, CB 47; object_uuid=fo-37b0d5847f35cbed
259,428 consensus_match cas_match_labels {"2437-79-8":"exactMatch"} group_key=2,2',4,4'-tetrachlorobiphenyl||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2437-79-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-37b0d5847f35cbed: {'2437-79-8': 'exactMatch'}
275,078 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,2',4,4'-tetrachlorobiphenyl'
281,568 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… rdkit_post_consensus from 'Clc1ccc(-c2ccc(Cl)cc2Cl)c(Cl)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,446 strip_catalogue_altlabels altLabel [{"@value":"1,1'-Biphenyl, 2,2',4,4'-tetrachloro-","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… [{"@value":"1,1'-Biphenyl, 2,2',4,4'-tetrachloro-","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… Removed 1 catalogue altLabel value(s): 'CB 47' (grade code)
296,576 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0750552d-917f-… associations resolved on the elementary layer
389,381 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H6Cl4"]… typed the way the ontology types it
396,509 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,510 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/5884 prefLabel ef:agent/bootstrap_labels ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v0 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v1
ef:activity/change/20260821T0609040591070000/5885 name ef:agent/bootstrap_labels ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v1 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v2
ef:activity/change/20260821T0609040591070000/5886 synonyms ef:agent/bootstrap_labels ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v2 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v3
ef:activity/change/20260821T0609040591070000/31088 context ef:agent/default_context_mapping ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v3 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v4
ef:activity/change/20260821T0609040591070000/31089 context_iri ef:agent/default_context_mapping ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v4 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v5
ef:activity/change/20260821T0609040591070000/215305 unit_iri ef:agent/unit_normalization ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v5 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v6
ef:activity/change/20260821T0609040591070000/232839 properties ef:agent/enrich_references ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v6 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v7
ef:activity/change/20260821T0609040591070000/232840 skos_definition ef:agent/enrich_references ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v7 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v8
ef:activity/change/20260821T0609040591070000/232841 references ef:agent/enrich_references ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v8 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v9
ef:activity/change/20260821T0609040591070000/249945 properties ef:agent/rdkit_pre_consensus ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v9 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v10
ef:activity/change/20260821T0609040591070000/255117 altLabel ef:agent/chebi_altlabels ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v10 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v11
ef:activity/change/20260821T0609040591070000/259427 altLabel ef:agent/consensus_match ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v11 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v12
ef:activity/change/20260821T0609040591070000/259428 cas_match_labels ef:agent/consensus_match ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v12 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v13
ef:activity/change/20260821T0609040591070000/275078 properties ef:agent/opsin_iupac ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v13 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v14
ef:activity/change/20260821T0609040591070000/281568 properties ef:agent/rdkit_post_consensus ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v14 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v15
ef:activity/change/20260821T0609040591070000/288446 altLabel ef:agent/strip_catalogue_altlabels ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v15 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v16
ef:activity/change/20260821T0609040591070000/296576 concept_associations ef:agent/carry_associations_onto_flows ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v16 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v17
ef:activity/change/20260821T0609040591070000/389381 properties ef:agent/normalise_property_values ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v17 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v18
ef:activity/change/20260821T0609040591070000/396509 types ef:agent/link_flows_to_their_substance ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v18 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v19
ef:activity/change/20260821T0609040591070000/396510 roles ef:agent/link_flows_to_their_substance ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v19 ef:flow/0750552d-917f-4fd1-842b-386bd7f0fb20/v20

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