Thiouracil
Everything that changed this flow. Back to the flow
08a91e70-3ddc-11dd-8fe4-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 4 catalogue altLabel value(s): 'NSC 19473' (registry code), 'NSC 290412' (registry code), 'NSC 290413' (registry code), 'NSC 290414' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=thiouracil||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'141-90-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e91be976334868d8: {'141-90-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['141-90-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_348530']; candidate_pubchem_cids=[26229, 1269845, 12281624, 13404106, 53420528]; selected_pubchem_cids=[1269845]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 3,452 | bootstrap_labels | prefLabel | — | [{"@value":"thiouracil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Bootstrapped prefLabel from legacy name field |
| 3,453 | bootstrap_labels | name | thiouracil | — | Purged legacy name field to enforce prefLabel usage |
| 3,454 | bootstrap_labels | synonyms | ["2,3-Dihydro-2-thioxo-4(1H)-pyrimidinone","2-Mercapto-4(1H)-pyrimidinone","2-Mercapto-4-hydroxypyrimidine","2-Mercapto… | [] | Removed legacy synonyms field in favor of structured labels |
| 31,972 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 31,973 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 214,491 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,887 | normalize_name_case | prefLabel | [{"@value":"thiouracil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Thiouracil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 230,507 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 230,508 | enrich_references | skos_definition | — | [{"@value":"A nucleobase analogue that is uracil in which the oxo group at C-2 is replaced by a thioxo group.","@langua… | Merged ChEBI/PubChem definitions into skos:definition |
| 230,509 | enrich_references | references | [] | [{"@id":"drugcentral:2640","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['141-90-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_348530']; candidate_pubchem_cids=[26229, 1269845, 12281624, 13404106, 53420528]; selected_pubchem_cids=[1269845]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,281 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | rdkit_pre_consensus from 'C1=CNC(=S)NC1=O'; added: monoisotopic_mass |
| 254,798 | chebi_altlabels | altLabel | [] | [{"@value":"2-Mercapto-pyrimidin-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 272,602 | consensus_match | altLabel | [{"@value":"2-Mercapto-pyrimidin-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"2-Mercapto-pyrimidin-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | group_key=thiouracil||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=141-90-2; added Common Chemistry CAS names as altLabel: 2,3-Dihydro-2-thioxo-4(1<em>H</em>)-pyrimidinone, 2-Mercapto-3<em>H</em>-pyrimidin-4-one, 2-Mercapto-4-hydroxypyrimidine, 2-Mercapto-4-pyrimidinone, 2-Sulfanyl-3,4-dihydropyrimidin-4-one, 2-Sulfanylidene-1,2,3,4-tetrahydropyrimidin-4-one, 2-Sulfanylidene-1<em>H</em>-pyrimidin-4-one, 2-Sulfanylpyrimidin-4-ol, 4(1<em>H</em>)-Pyrimidinone, 2,3-dihydro-2-thioxo-, 4-Hydroxy-2-mercaptopyrimidine, 6-Hydroxy-2-mercaptopyrimidine, Antagothyroil, Deracil, MeSH ID: D013889, NSC 19473, NSC 290412, NSC 290413, NSC 290414, Nobilen, Uracil, 2-thio-; object_uuid=fo-e91be976334868d8 |
| 272,603 | consensus_match | cas_match_labels | — | {"141-90-2":"exactMatch"} | group_key=thiouracil||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'141-90-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e91be976334868d8: {'141-90-2': 'exactMatch'} |
| 274,402 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Thiouracil' |
| 280,838 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | rdkit_post_consensus from 'O=c1cc[nH]c(=S)[nH]1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,955 | strip_catalogue_altlabels | altLabel | [{"@value":"2-Mercapto-pyrimidin-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"2-Mercapto-pyrimidin-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Removed 4 catalogue altLabel value(s): 'NSC 19473' (registry code), 'NSC 290412' (registry code), 'NSC 290413' (registry code), 'NSC 290414' (registry code) |
| 297,025 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… | associations resolved on the elementary layer |
| 388,696 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4N2OS"]… | typed the way the ontology types it |
| 395,535 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1302361922970000/3452 | prefLabel | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v0 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v1 |
| ef:activity/change/20260821T1302361922970000/3453 | name | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v1 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v2 |
| ef:activity/change/20260821T1302361922970000/3454 | synonyms | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v2 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v3 |
| ef:activity/change/20260821T1302361922970000/31972 | context | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v3 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v4 |
| ef:activity/change/20260821T1302361922970000/31973 | context_iri | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v4 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v5 |
| ef:activity/change/20260821T1302361922970000/214491 | unit_iri | ef:agent/unit_normalization | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v5 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v6 |
| ef:activity/change/20260821T1302361922970000/221887 | prefLabel | ef:agent/normalize_name_case | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v6 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v7 |
| ef:activity/change/20260821T1302361922970000/230507 | properties | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v7 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v8 |
| ef:activity/change/20260821T1302361922970000/230508 | skos_definition | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v8 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v9 |
| ef:activity/change/20260821T1302361922970000/230509 | references | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v9 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v10 |
| ef:activity/change/20260821T1302361922970000/249281 | properties | ef:agent/rdkit_pre_consensus | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v10 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v11 |
| ef:activity/change/20260821T1302361922970000/254798 | altLabel | ef:agent/chebi_altlabels | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v11 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v12 |
| ef:activity/change/20260821T1302361922970000/272602 | altLabel | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v12 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v13 |
| ef:activity/change/20260821T1302361922970000/272603 | cas_match_labels | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v13 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v14 |
| ef:activity/change/20260821T1302361922970000/274402 | properties | ef:agent/opsin_iupac | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v14 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v15 |
| ef:activity/change/20260821T1302361922970000/280838 | properties | ef:agent/rdkit_post_consensus | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v15 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v16 |
| ef:activity/change/20260821T1302361922970000/287955 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v16 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v17 |
| ef:activity/change/20260821T1302361922970000/297025 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v17 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v18 |
| ef:activity/change/20260821T1302361922970000/388696 | properties | ef:agent/normalise_property_values | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v18 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v19 |
| ef:activity/change/20260821T1302361922970000/395535 | types | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v19 | ef:flow/08a91e70-3ddc-11dd-8fe4-0050c2490048/v20 |