Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'Esteron 245' (trade name), 'NSC 430' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=2,4,5-trichlorophenoxyaceticacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'93-76-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4d341d303e0b9412: {'93-76-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['93-76-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27903']; candidate_pubchem_cids=[1480, 96159, 53400357]; selected_pubchem_cids=[1480]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
7,002 bootstrap_labels prefLabel [{"@value":"2,4,5-trichlorophenoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… Bootstrapped prefLabel from legacy name field
7,003 bootstrap_labels name 2,4,5-trichlorophenoxyacetic acid Purged legacy name field to enforce prefLabel usage
7,004 bootstrap_labels synonyms ["(2,4,5-Trichloor-fenoxy)-azijnzuur","(2,4,5-Trichlor-phenoxy)-essigsaeure","(2,4,5-Trichloro-Phenoxy)-Acetic Acid","(… [] Removed legacy synonyms field in favor of structured labels
32,812 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
32,813 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
215,683 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,705 normalize_name_case prefLabel [{"@value":"2,4,5-trichlorophenoxyacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… [{"@value":"2,4,5-trichlorophenoxyacetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
233,902 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
233,903 enrich_references skos_definition [{"@value":"A chlorophenoxyacetic acid that is phenoxyacetic acid in which the ring hydrogens at postions 2, 4 and 5 ar… Merged ChEBI/PubChem definitions into skos:definition
233,904 enrich_references references [] [{"@id":"gmelin:434052","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… Added references with provenance; cas_numbers=['93-76-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27903']; candidate_pubchem_cids=[1480, 96159, 53400357]; selected_pubchem_cids=[1480]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,260 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… rdkit_pre_consensus from 'C1=C(C(=CC(=C1Cl)Cl)Cl)OCC(=O)O'; added: monoisotopic_mass
255,260 chebi_altlabels altLabel [] [{"@value":"(2,4,5-Trichlorphenoxy)essigsaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","pro… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,861 consensus_match altLabel [{"@value":"(2,4,5-Trichlorphenoxy)essigsaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","pro… [{"@value":"(2,4,5-Trichlorphenoxy)essigsaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","pro… group_key=2,4,5-trichlorophenoxyaceticacid||dimension=Environmental > media=Ground > geography=Agricultural; cas=93-76-5; added Common Chemistry CAS names as altLabel: 2-(2,4,5-Trichlorophenoxy)acetic acid, Acetic acid, (2,4,5-trichlorophenoxy)-, Acetic acid, 2-(2,4,5-trichlorophenoxy)-, Arbokan, BCF-Bushkiller, Forst U 46, Fortex, NSC 430, Trichlorophenoxyacetic acid, Trioxon, Verton 2T; object_uuid=fo-4d341d303e0b9412
259,862 consensus_match cas_match_labels {"93-76-5":"exactMatch"} group_key=2,4,5-trichlorophenoxyaceticacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'93-76-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4d341d303e0b9412: {'93-76-5': 'exactMatch'}
275,418 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,4,5-trichlorophenoxyacetic Acid'
281,930 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… rdkit_post_consensus from 'O=C(O)COc1cc(Cl)c(Cl)cc1Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,706 strip_catalogue_altlabels altLabel [{"@value":"(2,4,5-Trichlorphenoxy)essigsaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","pro… [{"@value":"(2,4,5-Trichlorphenoxy)essigsaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","pro… Removed 2 catalogue altLabel value(s): 'Esteron 245' (trade name), 'NSC 430' (registry code)
297,463 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
389,726 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H5Cl3O3"… typed the way the ontology types it
396,988 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,989 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/7002 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/7003 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/7004 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/32812 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/32813 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/215683 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/222705 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/233902 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/233903 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/233904 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/250260 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/255260 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/259861 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/259862 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/275418 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/281930 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/288706 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/297463 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/389726 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/396988 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/396989 roles ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-9185-0050c2490048/v21

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