Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'CCS 301' (grade code), 'NSC 25499' (registry code)
cas_match_labels 1 consensus_match group_key=2-butanol||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'78-92-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b76834dfc9af0316: {'78-92-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['78-92-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35687']; candidate_pubchem_cids=[6568, 84682, 256761, 444683]; selected_pubchem_cids=[6568]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
7,039 bootstrap_labels prefLabel [{"@value":"2-butanol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
7,040 bootstrap_labels name 2-butanol Purged legacy name field to enforce prefLabel usage
7,041 bootstrap_labels synonyms ["(+) -2- Butanol","(+/-)-2-Butanol","(1)-Butan-2-ol","(S)-Butan-2-ol","+/-)-2-Butanol",".+/-.-2-Butanol","1-Methyl pro… [] Removed legacy synonyms field in favor of structured labels
32,906 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
32,907 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
215,689 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
233,930 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
233,931 enrich_references skos_definition [{"@value":"A secondary alcohol that is butane substituted by a hydroxy group at position 2.","@language":"en","provena… Merged ChEBI/PubChem definitions into skos:definition
233,932 enrich_references references [] [{"@id":"gmelin:1686","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['78-92-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35687']; candidate_pubchem_cids=[6568, 84682, 256761, 444683]; selected_pubchem_cids=[6568]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,263 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… rdkit_pre_consensus from 'CCC(C)O'; added: monoisotopic_mass
255,261 chebi_altlabels altLabel [] [{"@value":"1-methyl-1-propanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
260,576 consensus_match altLabel [{"@value":"1-methyl-1-propanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… [{"@value":"1-methyl-1-propanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… group_key=2-butanol||dimension=Environmental > media=Air > strata=Unknown; cas=78-92-2; added Common Chemistry CAS names as altLabel: (±)-2-Butanol, 3-Butanol, <em>dl</em>-<em>sec</em>-Butanol, <em>dl</em>-Methylethylcarbinol, <em>s</em>-Butanol, <span class="text-smallcaps">DL</span>-Butan-2-ol, CCS 301, Ethylmethyl carbinol, NSC 25499, Racemic-2-butanol; object_uuid=fo-b76834dfc9af0316
260,577 consensus_match cas_match_labels {"78-92-2":"exactMatch"} group_key=2-butanol||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'78-92-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b76834dfc9af0316: {'78-92-2': 'exactMatch'}
275,405 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-butanol'
281,917 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… rdkit_post_consensus from 'CCC(C)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,688 strip_catalogue_altlabels altLabel [{"@value":"1-methyl-1-propanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… [{"@value":"1-methyl-1-propanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… Removed 2 catalogue altLabel value(s): 'CCS 301' (grade code), 'NSC 25499' (registry code)
297,480 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
389,708 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… typed the way the ontology types it
396,974 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/7039 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v1
ef:activity/change/20260821T0609040591070000/7040 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v2
ef:activity/change/20260821T0609040591070000/7041 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v3
ef:activity/change/20260821T0609040591070000/32906 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v4
ef:activity/change/20260821T0609040591070000/32907 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v5
ef:activity/change/20260821T0609040591070000/215689 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v6
ef:activity/change/20260821T0609040591070000/233930 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v7
ef:activity/change/20260821T0609040591070000/233931 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v8
ef:activity/change/20260821T0609040591070000/233932 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v9
ef:activity/change/20260821T0609040591070000/250263 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v10
ef:activity/change/20260821T0609040591070000/255261 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v11
ef:activity/change/20260821T0609040591070000/260576 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v12
ef:activity/change/20260821T0609040591070000/260577 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v13
ef:activity/change/20260821T0609040591070000/275405 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v14
ef:activity/change/20260821T0609040591070000/281917 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v15
ef:activity/change/20260821T0609040591070000/288688 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v16
ef:activity/change/20260821T0609040591070000/297480 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v17
ef:activity/change/20260821T0609040591070000/389708 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v18
ef:activity/change/20260821T0609040591070000/396974 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-91b7-0050c2490048/v19

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