Formothion
Everything that changed this flow. Back to the flow
08a91e70-3ddc-11dd-9429-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 2 | consensus_match, strip_catalogue_altlabels | Removed 4 catalogue altLabel value(s): 'CP 53926' (grade code), 'ENT 27257' (grade code), 'S 6900' (grade code), 'S 6900 (insecticide)' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=formothion||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2540-82-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-12a604b3396a959e: {'2540-82-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['2540-82-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82126']; candidate_pubchem_cids=[17345, 4607364]; selected_pubchem_cids=[17345]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 7,403 | bootstrap_labels | prefLabel | — | [{"@value":"formothion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Bootstrapped prefLabel from legacy name field |
| 7,404 | bootstrap_labels | name | formothion | — | Purged legacy name field to enforce prefLabel usage |
| 7,405 | bootstrap_labels | synonyms | ["2-Dimethoxyphosphinothioylthio-N-formyl-N-methylacetamide","2-dimethoxyphosphinothioylsulfanyl-N-formyl-N-methylaceta… | [] | Removed legacy synonyms field in favor of structured labels |
| 34,120 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 34,121 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 215,810 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,809 | normalize_name_case | prefLabel | [{"@value":"formothion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Formothion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 234,273 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 234,274 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 234,275 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J3.031G","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['2540-82-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82126']; candidate_pubchem_cids=[17345, 4607364]; selected_pubchem_cids=[17345]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,359 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | rdkit_pre_consensus from 'CN(C=O)C(=O)CSP(=S)(OC)OC'; added: monoisotopic_mass |
| 267,295 | consensus_match | altLabel | [] | [{"@value":"<em>O</em>,<em>O</em>-Dimethyl <em>S</em>-(<em>N</em>-formyl-<em>N</em>-methylcarbamoylmethyl) phosphorodit… | group_key=formothion||dimension=Environmental > media=Ground > geography=Agricultural; cas=2540-82-1; added Common Chemistry CAS names as altLabel: <em>O</em>,<em>O</em>-Dimethyl <em>S</em>-(<em>N</em>-formyl-<em>N</em>-methylcarbamoylmethyl) phosphorodithioate, <em>O</em>,<em>O</em>-Dimethyl dithiophosphorylacetic acid <em>N</em>-methyl-<em>N</em>-formylamide, <em>O</em>,<em>O</em>-Dimethyl phosphorodithioate <em>N</em>-formyl-2-mercapto-<em>N</em>-methylacetamide <em>S</em>-ester, <em>S</em>-(<em>N</em>-Formyl-<em>N</em>-methylcarbamoylmethyl) <em>O</em>,<em>O</em>-dimethyl phosphorodithioate, Aflix, Anthio, Anthio 25, Anthio 33, CP 53926, ENT 27257, Phosphorodithioic acid, <em>O</em>,<em>O</em>-dimethyl ester, <em>S</em>-ester with <em>N</em>-formyl-2-mercapto-<em>N</em>-methylacetamide, Phosphorodithioic acid, <em>S</em>-[2-(formylmethylamino)-2-oxoethyl] <em>O</em>,<em>O</em>-dimethyl ester, S 6900, S 6900 (insecticide), Toprose; object_uuid=fo-12a604b3396a959e |
| 267,296 | consensus_match | cas_match_labels | — | {"2540-82-1":"exactMatch"} | group_key=formothion||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2540-82-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-12a604b3396a959e: {'2540-82-1': 'exactMatch'} |
| 275,517 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Phosphorodithioic acid, S-[2-(formylmethylamino)-2-oxoethyl] O,O-dimethyl ester' |
| 282,037 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | rdkit_post_consensus from 'COP(=S)(OC)SCC(=O)N(C)C=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,782 | strip_catalogue_altlabels | altLabel | [{"@value":"<em>O</em>,<em>O</em>-Dimethyl <em>S</em>-(<em>N</em>-formyl-<em>N</em>-methylcarbamoylmethyl) phosphorodit… | [{"@value":"O,O-Dimethyl S-(N-formyl-N-methylcarbamoylmethyl) phosphorodithioate","@language":"en","source":{"prov:wasG… | Removed 4 catalogue altLabel value(s): 'CP 53926' (grade code), 'ENT 27257' (grade code), 'S 6900' (grade code), 'S 6900 (insecticide)' (grade code) |
| 298,094 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… | associations resolved on the elementary layer |
| 389,828 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12NO4PS… | typed the way the ontology types it |
| 397,166 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/7403 | prefLabel | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v0 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v1 |
| ef:activity/change/20260822T0600486828500000/7404 | name | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v1 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v2 |
| ef:activity/change/20260822T0600486828500000/7405 | synonyms | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v2 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v3 |
| ef:activity/change/20260822T0600486828500000/34120 | context | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v3 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v4 |
| ef:activity/change/20260822T0600486828500000/34121 | context_iri | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v4 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v5 |
| ef:activity/change/20260822T0600486828500000/215810 | unit_iri | ef:agent/unit_normalization | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v5 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v6 |
| ef:activity/change/20260822T0600486828500000/222809 | prefLabel | ef:agent/normalize_name_case | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v6 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v7 |
| ef:activity/change/20260822T0600486828500000/234273 | properties | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v7 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v8 |
| ef:activity/change/20260822T0600486828500000/234274 | skos_definition | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v8 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v9 |
| ef:activity/change/20260822T0600486828500000/234275 | references | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v9 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v10 |
| ef:activity/change/20260822T0600486828500000/250359 | properties | ef:agent/rdkit_pre_consensus | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v10 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v11 |
| ef:activity/change/20260822T0600486828500000/267295 | altLabel | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v11 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v12 |
| ef:activity/change/20260822T0600486828500000/267296 | cas_match_labels | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v12 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v13 |
| ef:activity/change/20260822T0600486828500000/275517 | properties | ef:agent/opsin_iupac | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v13 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v14 |
| ef:activity/change/20260822T0600486828500000/282037 | properties | ef:agent/rdkit_post_consensus | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v14 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v15 |
| ef:activity/change/20260822T0600486828500000/288782 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v15 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v16 |
| ef:activity/change/20260822T0600486828500000/298094 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v16 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v17 |
| ef:activity/change/20260822T0600486828500000/389828 | properties | ef:agent/normalise_property_values | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v17 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v18 |
| ef:activity/change/20260822T0600486828500000/397166 | types | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v18 | ef:flow/08a91e70-3ddc-11dd-9429-0050c2490048/v19 |