Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=maleicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'110-16-7': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8343610c4d311807: {'110-16-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['110-16-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_18300']; candidate_pubchem_cids=[723, 237786, 444266, 444972, 5288227, 77519379]; selected_pubchem_cids=[444266]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
7,678 bootstrap_labels prefLabel [{"@value":"maleic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
7,679 bootstrap_labels name maleic acid Purged legacy name field to enforce prefLabel usage
7,680 bootstrap_labels synonyms ["(2Z)-but-2-enedioic acid","(Z)-2-Butenedioic acid","(Z)-Butenedioic acid","(Z)-but-2-enedioic acid","1,2-Ethylenedica… [] Removed legacy synonyms field in favor of structured labels
34,982 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
34,983 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
215,903 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,889 normalize_name_case prefLabel [{"@value":"maleic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Maleic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,532 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,533 enrich_references skos_definition [{"@value":"A butenedioic acid in which the double bond has cis- (Z)-configuration.","@language":"en","provenance":{"pr… Merged ChEBI/PubChem definitions into skos:definition
234,534 enrich_references references [] [{"@id":"beilstein:1903639","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['110-16-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_18300']; candidate_pubchem_cids=[723, 237786, 444266, 444972, 5288227, 77519379]; selected_pubchem_cids=[444266]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,426 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… rdkit_pre_consensus from 'C(=CC(=O)O)C(=O)O'; added: inchi2d_string, monoisotopic_mass
255,415 chebi_altlabels altLabel [] [{"@value":"(2Z)-but-2-enedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,500 consensus_match altLabel [{"@value":"(2Z)-but-2-enedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"(2Z)-but-2-enedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… group_key=maleicacid||dimension=Environmental > media=Ground > geography=Agricultural; cas=110-16-7; added Common Chemistry CAS names as altLabel: (2<em>Z</em>)-2-Butenedioic acid, (2<em>Z</em>)-Butene-2-dioic acid, 2-Butenedioic acid (2<em>Z</em>)-, 2-Butenedioic acid (<em>Z</em>)-, 2-Butenedioic acid, (<em>Z</em>)-, <em>cis</em>-2-Butenedioic acid, Beckacite F 896, Maleinic acid, Malezid CM, MeSH ID: D008298, Scotchbond Multipurpose Etchant; object_uuid=fo-8343610c4d311807
268,501 consensus_match cas_match_labels {"110-16-7":"exactMatch"} group_key=maleicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'110-16-7': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8343610c4d311807: {'110-16-7': 'exactMatch'}
275,591 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Maleic Acid'
282,124 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… rdkit_post_consensus from 'O=C(O)/C=C\\C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,367 dedupe_altlabels altLabel [{"@value":"(2Z)-but-2-enedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"(2Z)-but-2-enedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Deduplicated altLabel values and removed entries matching prefLabel
298,521 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
389,912 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… typed the way the ontology types it
397,298 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
397,299 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O4"],"… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/7678 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v1
ef:activity/change/20260822T0600486828500000/7679 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v2
ef:activity/change/20260822T0600486828500000/7680 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v3
ef:activity/change/20260822T0600486828500000/34982 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v4
ef:activity/change/20260822T0600486828500000/34983 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v5
ef:activity/change/20260822T0600486828500000/215903 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v6
ef:activity/change/20260822T0600486828500000/222889 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v7
ef:activity/change/20260822T0600486828500000/234532 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v8
ef:activity/change/20260822T0600486828500000/234533 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v9
ef:activity/change/20260822T0600486828500000/234534 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v10
ef:activity/change/20260822T0600486828500000/250426 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v11
ef:activity/change/20260822T0600486828500000/255415 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v12
ef:activity/change/20260822T0600486828500000/268500 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v13
ef:activity/change/20260822T0600486828500000/268501 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v14
ef:activity/change/20260822T0600486828500000/275591 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v15
ef:activity/change/20260822T0600486828500000/282124 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v16
ef:activity/change/20260822T0600486828500000/292367 altLabel ef:agent/dedupe_altlabels ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v17
ef:activity/change/20260822T0600486828500000/298521 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v18
ef:activity/change/20260822T0600486828500000/389912 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v19
ef:activity/change/20260822T0600486828500000/397298 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v20
ef:activity/change/20260822T0600486828500000/397299 properties ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-95e4-0050c2490048/v21

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