Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'Chel 300' (grade code), 'N 0098' (grade code), 'NSC 2121' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=nitrilotriaceticacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'139-13-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-19253a98d1a05690: {'139-13-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['139-13-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44557']; candidate_pubchem_cids=[8758, 17962642]; selected_pubchem_cids=[8758]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
3,407 bootstrap_labels prefLabel [{"@value":"nitrilotriacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Bootstrapped prefLabel from legacy name field
3,408 bootstrap_labels name nitrilotriacetic acid Purged legacy name field to enforce prefLabel usage
3,409 bootstrap_labels synonyms [".alpha.,.alpha.',.alpha.''-Trimethylaminetricarboxylic acid","2,2',2''-nitrilotriacetic acid","2-[bis(carboxymethyl)a… [] Removed legacy synonyms field in favor of structured labels
35,466 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
35,467 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
214,476 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,875 normalize_name_case prefLabel [{"@value":"nitrilotriacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… [{"@value":"Nitrilotriacetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,462 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,463 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
230,464 enrich_references references [] [{"@id":"beilstein:1710776","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['139-13-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44557']; candidate_pubchem_cids=[8758, 17962642]; selected_pubchem_cids=[8758]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,268 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… rdkit_pre_consensus from 'C(C(=O)O)N(CC(=O)O)CC(=O)O'; added: monoisotopic_mass
254,788 chebi_altlabels altLabel [] [{"@value":"Complexon I","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Added 14 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
269,887 consensus_match altLabel [{"@value":"Complexon I","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"Complexon I","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… group_key=nitrilotriaceticacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=139-13-9; added Common Chemistry CAS names as altLabel: (Bis-carboxymethyl-amino)-acetic acid, 2-[Bis(carboxymethyl)amino]acetic acid, 412: PN: WO2007070372 PAGE: 72 claimed protein, Acetic acid, nitrilotri-, Chel 300, Chelest NT, Dissolvine A, Dissolvine AZ, Glycine, <em>N</em>,<em>N</em>-bis(carboxymethyl)-, Glycine-<em>N</em>,<em>N</em>-diacetic acid, Hampshire NTA acid, MeSH ID: D009571, N 0098, NSC 2121, Nitrilo-2,2′,2′′-triacetic acid, Nitrilo-<em>N</em>,<em>N</em>,<em>N</em>-triacetic acid, Nitrilotris(methylenecarboxylic acid), Titriplex I, Trilon AS, Tris(carboxymethyl)amine, Tris(hydroxycarbonylmethyl)amine, Versene NTA acid, α,α′,α′′-Trimethylaminetricarboxylic acid; object_uuid=fo-19253a98d1a05690
269,888 consensus_match cas_match_labels {"139-13-9":"exactMatch"} group_key=nitrilotriaceticacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'139-13-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-19253a98d1a05690: {'139-13-9': 'exactMatch'}
274,388 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Nitrilotriacetic Acid'
280,823 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… rdkit_post_consensus from 'O=C(O)CN(CC(=O)O)CC(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,940 strip_catalogue_altlabels altLabel [{"@value":"Complexon I","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"Complexon I","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Removed 3 catalogue altLabel value(s): 'Chel 300' (grade code), 'N 0098' (grade code), 'NSC 2121' (registry code)
298,763 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
388,681 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H9NO6"],… typed the way the ontology types it
395,516 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/3407 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v1
ef:activity/change/20260822T0600486828500000/3408 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v2
ef:activity/change/20260822T0600486828500000/3409 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v3
ef:activity/change/20260822T0600486828500000/35466 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v4
ef:activity/change/20260822T0600486828500000/35467 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v5
ef:activity/change/20260822T0600486828500000/214476 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v6
ef:activity/change/20260822T0600486828500000/221875 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v7
ef:activity/change/20260822T0600486828500000/230462 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v8
ef:activity/change/20260822T0600486828500000/230463 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v9
ef:activity/change/20260822T0600486828500000/230464 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v10
ef:activity/change/20260822T0600486828500000/249268 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v11
ef:activity/change/20260822T0600486828500000/254788 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v12
ef:activity/change/20260822T0600486828500000/269887 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v13
ef:activity/change/20260822T0600486828500000/269888 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v14
ef:activity/change/20260822T0600486828500000/274388 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v15
ef:activity/change/20260822T0600486828500000/280823 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v16
ef:activity/change/20260822T0600486828500000/287940 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v17
ef:activity/change/20260822T0600486828500000/298763 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v18
ef:activity/change/20260822T0600486828500000/388681 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v19
ef:activity/change/20260822T0600486828500000/395516 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-96db-0050c2490048/v20

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