Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'DPX 1410' (grade code), 'DPX 1410L' (grade code), 'NSC 379588' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=oxamyl||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'23135-22-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3f1f610830b1e145: {'23135-22-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['23135-22-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38539']; candidate_pubchem_cids=[31657, 5366286, 9595287]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
7,846 bootstrap_labels prefLabel [{"@value":"oxamyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Bootstrapped prefLabel from legacy name field
7,847 bootstrap_labels name oxamyl Purged legacy name field to enforce prefLabel usage
7,848 bootstrap_labels synonyms ["2-(Dimethylamino)-N-(((methylamino)carbonyl)oxy)-2-oxoethanimidothioic acid methyl ester","2-Dimethylamino-1-(methylt… [] Removed legacy synonyms field in favor of structured labels
35,664 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
35,665 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
215,962 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,943 normalize_name_case prefLabel [{"@value":"oxamyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Oxamyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,695 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0, commonchemistry_cas=['23135-22-0'])
234,696 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
234,697 enrich_references references [] [{"@id":"beilstein:2050910","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['23135-22-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38539']; candidate_pubchem_cids=[31657, 5366286, 9595287]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,479 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… rdkit_pre_consensus from 'CNC(=O)ON=C(SC)C(=O)N(C)C'; added: monoisotopic_mass
255,458 chebi_altlabels altLabel [] [{"@value":"2-(Dimethylamino)-N-(((methylamino)carbonyl)oxy)-2-oxoethanimidothioic acid methyl ester","@language":"en",… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,227 consensus_match altLabel [{"@value":"2-(Dimethylamino)-N-(((methylamino)carbonyl)oxy)-2-oxoethanimidothioic acid methyl ester","@language":"en",… [{"@value":"2-(Dimethylamino)-N-(((methylamino)carbonyl)oxy)-2-oxoethanimidothioic acid methyl ester","@language":"en",… group_key=oxamyl||dimension=Environmental > media=Ground > geography=Agricultural; cas=23135-22-0; added Common Chemistry CAS names as altLabel: Carbamic acid, methyl-, <em>O</em>-[[[(dimethylcarbamoyl)methylthio]methylene]amino] deriv., DPX 1410, DPX 1410L, Du Pont 1410, Ethanimidothioic acid, 2-(dimethylamino)-<em>N</em>-[[(methylamino)carbonyl]oxy]-2-oxo-, methyl ester, Methyl 2-(dimethylamino)-<em>N</em>-[(methylcarbamoyl)oxy]-2-oxoethanimidothioate, NSC 379588, Oxamimidic acid, <em>N</em>′,<em>N</em>′-dimethyl-<em>N</em>-[(methylcarbamoyl)oxy]-1-thio-, methyl ester, Oxamyl (pesticide), Thioxamyl, Vydate, Vydate CLV, Vydate G, Vydate L; object_uuid=fo-3f1f610830b1e145
270,228 consensus_match cas_match_labels {"23135-22-0":"exactMatch"} group_key=oxamyl||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'23135-22-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3f1f610830b1e145: {'23135-22-0': 'exactMatch'}
275,658 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-(Dimethylamino)-N-(((methylamino)carbonyl)oxy)-2-oxoethanimidothioic acid methyl ester'
282,196 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… rdkit_post_consensus from 'CNC(=O)ON=C(SC)C(=O)N(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,891 strip_catalogue_altlabels altLabel [{"@value":"2-(Dimethylamino)-N-(((methylamino)carbonyl)oxy)-2-oxoethanimidothioic acid methyl ester","@language":"en",… [{"@value":"2-(Dimethylamino)-N-(((methylamino)carbonyl)oxy)-2-oxoethanimidothioic acid methyl ester","@language":"en",… Removed 3 catalogue altLabel value(s): 'DPX 1410' (grade code), 'DPX 1410L' (grade code), 'NSC 379588' (registry code)
298,882 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
389,987 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H13N3O3S… typed the way the ontology types it
397,394 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
397,395 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/7846 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/7847 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/7848 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/35664 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/35665 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/215962 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/222943 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/234695 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/234696 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/234697 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/250479 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/255458 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/270227 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/270228 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/275658 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/282196 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/288891 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/298882 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/389987 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/397394 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/397395 roles ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-973d-0050c2490048/v21

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