Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'PP 211' (grade code), 'R 42211' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=pirimiphos-ethyl||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'23505-41-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6274c2c58ecda60a: {'23505-41-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 245-704-0 from CAS 23505-41-1
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['23505-41-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82146']; candidate_pubchem_cids=[31957]; selected_pubchem_cids=[31957]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
7,889 bootstrap_labels prefLabel [{"@value":"pirimiphos-ethyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
7,890 bootstrap_labels name pirimiphos-ethyl Purged legacy name field to enforce prefLabel usage
7,891 bootstrap_labels synonyms ["2-Diethylamino-6-methyl-4-pyrimidinyl diethyl phosphorothioate","2-Diethylamino-6-methylpyrimidin-4-yl diethyl phosph… [] Removed legacy synonyms field in favor of structured labels
35,880 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
35,881 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
215,971 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,949 normalize_name_case prefLabel [{"@value":"pirimiphos-ethyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"Pirimiphos-ethyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,859 ec_cross_check ec_numbers [] ["245-704-0"] Resolved from EC-inventory: 245-704-0 from CAS 23505-41-1
234,732 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,733 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
234,734 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J3.793A","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['23505-41-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82146']; candidate_pubchem_cids=[31957]; selected_pubchem_cids=[31957]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,482 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… rdkit_pre_consensus from 'CCN(CC)C1=NC(=CC(=N1)OP(=S)(OCC)OCC)C'; added: monoisotopic_mass
255,463 chebi_altlabels altLabel [] [{"@value":"Pirimiphosethyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,773 consensus_match altLabel [{"@value":"Pirimiphosethyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"Pirimiphosethyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… group_key=pirimiphos-ethyl||dimension=Environmental > media=Ground > geography=Agricultural; cas=23505-41-1; added Common Chemistry CAS names as altLabel: 2-Diethylamino-6-methyl-pyrimidin-4-yl-diethylphosphorothionate, <em>O</em>,<em>O</em>-Diethyl <em>O</em>-(2-diethylamino-6-methyl-4-pyrimidinyl)phosphorothioate, <em>O</em>-(2-Diethylamino-4-methyl-6-pyrimidyl) <em>O</em>,<em>O</em>-diethyl phosphorothioate, <em>O</em>-[2-(Diethylamino)-6-methyl-4-pyrimidinyl] <em>O</em>,<em>O</em>-diethyl phosphorothioate, Ethyl pirimiphos, Fernex, PP 211, Phosphorothioic acid, <em>O</em>-[2-(diethylamino)-6-methyl-4-pyrimidinyl] <em>O</em>,<em>O</em>-diethyl ester, Pirimiphos A, Pirimiphos ethyl, Primicid, R 42211, SolGard; object_uuid=fo-6274c2c58ecda60a
270,774 consensus_match cas_match_labels {"23505-41-1":"exactMatch"} group_key=pirimiphos-ethyl||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'23505-41-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6274c2c58ecda60a: {'23505-41-1': 'exactMatch'}
275,652 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'O-(2-Diethylamino-4-methyl-6-pyrimidyl) O,O-diethyl phosphorothioate'
282,191 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… rdkit_post_consensus from 'CCOP(=S)(OCC)Oc1cc(C)nc(N(CC)CC)n1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,881 strip_catalogue_altlabels altLabel [{"@value":"Pirimiphosethyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"Pirimiphosethyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Removed 2 catalogue altLabel value(s): 'PP 211' (grade code), 'R 42211' (grade code)
298,970 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
389,979 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H24N3O3… typed the way the ontology types it
397,390 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/7889 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v1
ef:activity/change/20260821T1554374006150000/7890 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v2
ef:activity/change/20260821T1554374006150000/7891 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v3
ef:activity/change/20260821T1554374006150000/35880 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v4
ef:activity/change/20260821T1554374006150000/35881 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v5
ef:activity/change/20260821T1554374006150000/215971 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v6
ef:activity/change/20260821T1554374006150000/222949 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v7
ef:activity/change/20260821T1554374006150000/226859 ec_numbers ef:agent/ec_cross_check ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v8
ef:activity/change/20260821T1554374006150000/234732 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v9
ef:activity/change/20260821T1554374006150000/234733 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v10
ef:activity/change/20260821T1554374006150000/234734 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v11
ef:activity/change/20260821T1554374006150000/250482 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v12
ef:activity/change/20260821T1554374006150000/255463 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v13
ef:activity/change/20260821T1554374006150000/270773 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v14
ef:activity/change/20260821T1554374006150000/270774 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v15
ef:activity/change/20260821T1554374006150000/275652 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v16
ef:activity/change/20260821T1554374006150000/282191 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v17
ef:activity/change/20260821T1554374006150000/288881 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v18
ef:activity/change/20260821T1554374006150000/298970 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v19
ef:activity/change/20260821T1554374006150000/389979 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v20
ef:activity/change/20260821T1554374006150000/397390 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-97b8-0050c2490048/v21

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