Brightway Flows 1.0
GitHub

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 8 catalogue altLabel value(s): 'BYX 6' (grade code), 'EM 50' (grade code), 'M 00247' (grade code), 'NSC 62785' (registry code), 'S 0095' (grade code), 'S 4972' (grade code), 'SM 180' (grade code), 'TTB 7302' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=styrene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-42-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2f81ba8ffdd704ca: {'100-42-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['100-42-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27452']; candidate_pubchem_cids=[5984, 7501, 66284]; selected_pubchem_cids=[7501]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
8,071 bootstrap_labels prefLabel — [{"@value":"styrene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bright… Bootstrapped prefLabel from legacy name field
8,072 bootstrap_labels name styrene — Purged legacy name field to enforce prefLabel usage
8,073 bootstrap_labels synonyms ["AC1L1OWJ","AC1Q2AAB","AKOS000119972","Annamene","Benzene, ethenyl-","Benzene, ethenyl-, homopolymer, hydrogenated","B… [] Removed legacy synonyms field in favor of structured labels
36,523 default_context_mapping context — {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
36,524 default_context_mapping context_iri — https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
216,034 unit_normalization unit_iri — https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,001 normalize_name_case prefLabel [{"@value":"styrene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bright… [{"@value":"Styrene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bright… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,902 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8"],"at… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,903 enrich_references skos_definition — [{"@value":"A vinylarene that is benzene carrying a vinyl group. It has been isolated from the benzoin resin produced b… Merged ChEBI/PubChem definitions into skos:definition
234,904 enrich_references references [] [{"@id":"gmelin:2991","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"brigh… Added references with provenance; cas_numbers=['100-42-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27452']; candidate_pubchem_cids=[5984, 7501, 66284]; selected_pubchem_cids=[7501]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
255,499 chebi_altlabels altLabel [] [{"@value":"Phenylethylene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,134 consensus_match altLabel [{"@value":"Phenylethylene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"Phenylethylene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… group_key=styrene||dimension=Environmental > media=Ground > geography=Agricultural; cas=100-42-5; added Common Chemistry CAS names as altLabel: BYX 6, Benzene, ethenyl-, Cinnamene, EM 50, M 00247, Maomin SM, MeSH ID: D020058, NSC 62785, Phenethylene, S 0095, S 4972, SM 180, STC, Styrole, Styrolene, Styropol SO, TTB 7302, Vinylbenzol; object_uuid=fo-2f81ba8ffdd704ca
272,135 consensus_match cas_match_labels — {"100-42-5":"exactMatch"} group_key=styrene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-42-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2f81ba8ffdd704ca: {'100-42-5': 'exactMatch'}
275,702 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8"],"at… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Styrene'
282,253 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8"],"at… rdkit_post_consensus from 'C=Cc1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,929 strip_catalogue_altlabels altLabel [{"@value":"Phenylethylene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"Phenylethylene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Removed 8 catalogue altLabel value(s): 'BYX 6' (grade code), 'EM 50' (grade code), 'M 00247' (grade code), 'NSC 62785' (registry code), 'S 0095' (grade code), 'S 4972' (grade code), 'SM 180' (grade code), 'TTB 7302' (grade code)
299,328 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,064 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8"],"at… typed the way the ontology types it
397,507 link_flows_to_their_substance types — ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20261019T0712047113160000/8071 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v1
ef:activity/change/20261019T0712047113160000/8072 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v2
ef:activity/change/20261019T0712047113160000/8073 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v3
ef:activity/change/20261019T0712047113160000/36523 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v4
ef:activity/change/20261019T0712047113160000/36524 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v5
ef:activity/change/20261019T0712047113160000/216034 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v6
ef:activity/change/20261019T0712047113160000/223001 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v7
ef:activity/change/20261019T0712047113160000/234902 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v8
ef:activity/change/20261019T0712047113160000/234903 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v9
ef:activity/change/20261019T0712047113160000/234904 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v10
ef:activity/change/20261019T0712047113160000/255499 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v11
ef:activity/change/20261019T0712047113160000/272134 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v12
ef:activity/change/20261019T0712047113160000/272135 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v13
ef:activity/change/20261019T0712047113160000/275702 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v14
ef:activity/change/20261019T0712047113160000/282253 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v15
ef:activity/change/20261019T0712047113160000/288929 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v16
ef:activity/change/20261019T0712047113160000/299328 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v17
ef:activity/change/20261019T0712047113160000/390064 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v18
ef:activity/change/20261019T0712047113160000/397507 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9911-0050c2490048/v19

Keyboard

?
Show or hide this map
/
Focus search
Esc
Close