Consensus flow list

By field

15 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=tebutam||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'35256-85-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cfb8cc8917aab6aa: {'35256-85-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 252-470-3 from CAS 35256-85-0
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['35256-85-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82043']; candidate_pubchem_cids=[92299, 254313]; selected_pubchem_cids=[92299]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
8,095 bootstrap_labels prefLabel [{"@value":"tebutam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Bootstrapped prefLabel from legacy name field
8,096 bootstrap_labels name tebutam Purged legacy name field to enforce prefLabel usage
8,097 bootstrap_labels synonyms ["2,2-Dimethyl-N-(1-methylethyl)-N-(phenylmethyl)propanamide","2,2-Dimethyl-N-(1-methylethyl)-N-(phenylmethyl)propanami… [] Removed legacy synonyms field in favor of structured labels
36,620 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
36,621 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
216,039 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,005 normalize_name_case prefLabel [{"@value":"tebutam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Tebutam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,876 ec_cross_check ec_numbers [] ["252-470-3"] Resolved from EC-inventory: 252-470-3 from CAS 35256-85-0
234,921 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,922 enrich_references skos_definition [{"@value":"A monocarboxylic acid amide that is propanamide substituted by a benzyl and an isopropyl group at the nitro… Merged ChEBI/PubChem definitions into skos:definition
234,923 enrich_references references [] [{"@id":"agr:IND86014658","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['35256-85-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82043']; candidate_pubchem_cids=[92299, 254313]; selected_pubchem_cids=[92299]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,537 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… rdkit_pre_consensus from 'CC(C)N(CC1=CC=CC=C1)C(=O)C(C)(C)C'; added: monoisotopic_mass
255,498 chebi_altlabels altLabel [] [{"@value":"Butam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,247 consensus_match altLabel [{"@value":"Butam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"Butam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… group_key=tebutam||dimension=Environmental > media=Ground > geography=Agricultural; cas=35256-85-0; added Common Chemistry CAS names as altLabel: 2,2-Dimethyl-<em>N</em>-(1-methylethyl)-<em>N</em>-(phenylmethyl)propanamide, Comodor, Propanamide, 2,2-dimethyl-<em>N</em>-(1-methylethyl)-<em>N</em>-(phenylmethyl)-; object_uuid=fo-cfb8cc8917aab6aa
272,248 consensus_match cas_match_labels {"35256-85-0":"exactMatch"} group_key=tebutam||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'35256-85-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cfb8cc8917aab6aa: {'35256-85-0': 'exactMatch'}
275,699 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'N-Benzyl-N-isopropyltrimethylacetamide'
282,247 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… rdkit_post_consensus from 'CC(C)N(Cc1ccccc1)C(=O)C(C)(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,380 dedupe_altlabels altLabel [{"@value":"Butam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"Butam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Deduplicated altLabel values and removed entries matching prefLabel
299,329 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,030 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H23NO"]… typed the way the ontology types it
397,480 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
397,481 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/8095 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v1
ef:activity/change/20260820T1812399309960000/8096 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v2
ef:activity/change/20260820T1812399309960000/8097 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v3
ef:activity/change/20260820T1812399309960000/36620 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v4
ef:activity/change/20260820T1812399309960000/36621 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v5
ef:activity/change/20260820T1812399309960000/216039 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v6
ef:activity/change/20260820T1812399309960000/223005 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v7
ef:activity/change/20260820T1812399309960000/226876 ec_numbers ef:agent/ec_cross_check ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v8
ef:activity/change/20260820T1812399309960000/234921 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v9
ef:activity/change/20260820T1812399309960000/234922 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v10
ef:activity/change/20260820T1812399309960000/234923 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v11
ef:activity/change/20260820T1812399309960000/250537 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v12
ef:activity/change/20260820T1812399309960000/255498 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v13
ef:activity/change/20260820T1812399309960000/272247 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v14
ef:activity/change/20260820T1812399309960000/272248 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v15
ef:activity/change/20260820T1812399309960000/275699 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v16
ef:activity/change/20260820T1812399309960000/282247 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v17
ef:activity/change/20260820T1812399309960000/292380 altLabel ef:agent/dedupe_altlabels ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v18
ef:activity/change/20260820T1812399309960000/299329 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v19
ef:activity/change/20260820T1812399309960000/390030 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v20
ef:activity/change/20260820T1812399309960000/397480 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v21
ef:activity/change/20260820T1812399309960000/397481 roles ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v21 ef:flow/08a91e70-3ddc-11dd-9943-0050c2490048/v22

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