Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 77451' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=tetralin||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'119-64-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a7bf308cba17344a: {'119-64-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['119-64-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35008']; candidate_pubchem_cids=[8404, 7060669, 22117780]; selected_pubchem_cids=[8404]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
8,123 bootstrap_labels prefLabel [{"@value":"tetralin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
8,124 bootstrap_labels name tetralin Purged legacy name field to enforce prefLabel usage
8,125 bootstrap_labels synonyms ["(C4-C5) Alkyltetrahydronaphthalenes",".delta.(sup 5,7,9)-Naphthantriene","1,2,3,4-Tetrahydronaphthalene","AC1L1QXB","… [] Removed legacy synonyms field in favor of structured labels
36,672 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
36,673 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
216,048 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,009 normalize_name_case prefLabel [{"@value":"tetralin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Tetralin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,948 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,949 enrich_references skos_definition [{"@value":"An ortho-fused bicyclic hydrocarbon that is 1,2,3,4-tetrahydro derivative of naphthalene.","@language":"en"… Merged ChEBI/PubChem definitions into skos:definition
234,950 enrich_references references [] [{"@id":"gmelin:3348","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['119-64-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35008']; candidate_pubchem_cids=[8404, 7060669, 22117780]; selected_pubchem_cids=[8404]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
255,505 chebi_altlabels altLabel [] [{"@value":"1,2,3,4-Tetrahydronaphthalene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,463 consensus_match altLabel [{"@value":"1,2,3,4-Tetrahydronaphthalene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… [{"@value":"1,2,3,4-Tetrahydronaphthalene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… group_key=tetralin||dimension=Environmental > media=Air > strata=Unknown; cas=119-64-2; added Common Chemistry CAS names as altLabel: NSC 77451, Naphthalene, 1,2,3,4-tetrahydro-, Tetrahydronaphthalene, Tetranap; object_uuid=fo-a7bf308cba17344a
272,464 consensus_match cas_match_labels {"119-64-2":"exactMatch"} group_key=tetralin||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'119-64-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a7bf308cba17344a: {'119-64-2': 'exactMatch'}
275,710 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Tetralin'
282,262 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12"],"… rdkit_post_consensus from 'c1ccc2c(c1)CCCC2'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,926 strip_catalogue_altlabels altLabel [{"@value":"1,2,3,4-Tetrahydronaphthalene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… [{"@value":"1,2,3,4-Tetrahydronaphthalene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… Removed 1 catalogue altLabel value(s): 'NSC 77451' (registry code)
299,362 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,047 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12"],"… typed the way the ontology types it
397,502 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/8123 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v1
ef:activity/change/20260821T1554374006150000/8124 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v2
ef:activity/change/20260821T1554374006150000/8125 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v3
ef:activity/change/20260821T1554374006150000/36672 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v4
ef:activity/change/20260821T1554374006150000/36673 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v5
ef:activity/change/20260821T1554374006150000/216048 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v6
ef:activity/change/20260821T1554374006150000/223009 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v7
ef:activity/change/20260821T1554374006150000/234948 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v8
ef:activity/change/20260821T1554374006150000/234949 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v9
ef:activity/change/20260821T1554374006150000/234950 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v10
ef:activity/change/20260821T1554374006150000/255505 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v11
ef:activity/change/20260821T1554374006150000/272463 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v12
ef:activity/change/20260821T1554374006150000/272464 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v13
ef:activity/change/20260821T1554374006150000/275710 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v14
ef:activity/change/20260821T1554374006150000/282262 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v15
ef:activity/change/20260821T1554374006150000/288926 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v16
ef:activity/change/20260821T1554374006150000/299362 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v17
ef:activity/change/20260821T1554374006150000/390047 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v18
ef:activity/change/20260821T1554374006150000/397502 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-995d-0050c2490048/v19

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