Trp-P-2 Acetate
Everything that changed this flow. Back to the flow
08a91e70-3ddc-11dd-9a46-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 2 | consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=trp-p-2acetate||dimension=Environmental > media=Water > water_body=Unknown; group_sources=[]; cas_sources={'72254-58-1': []}; assigned CAS labels from group consensus; object_uuid=fo-5c78105c21696f2a: {'72254-58-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['72254-58-1']; matched_chebi_ids=[]; candidate_pubchem_cids=[5284475, 5284476, 44119115]; selected_pubchem_cids=[5284475]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 8,230 | bootstrap_labels | prefLabel | — | [{"@value":"Trp-P-2 acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | Bootstrapped prefLabel from legacy name field |
| 8,231 | bootstrap_labels | name | Trp-P-2 acetate | — | Purged legacy name field to enforce prefLabel usage |
| 8,232 | bootstrap_labels | synonyms | ["1-methyl-5H-pyrido[4,3-b]indol-3-amine","1-methyl-5H-pyrido[4,3-b]indol-3-amine acetate","3-AMINO-1-METHYL-5H-PYRIDO[… | [] | Removed legacy synonyms field in favor of structured labels |
| 37,134 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 37,135 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 216,079 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,033 | normalize_name_case | prefLabel | [{"@value":"Trp-P-2 acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | [{"@value":"Trp-P-2 Acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 235,041 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1) |
| 235,042 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 235,043 | enrich_references | references | [] | [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=72254-58-1","provenance":{"prov:wasGeneratedBy":"enrich_referenc… | Added references with provenance; cas_numbers=['72254-58-1']; matched_chebi_ids=[]; candidate_pubchem_cids=[5284475, 5284476, 44119115]; selected_pubchem_cids=[5284475]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,571 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | rdkit_pre_consensus from 'CC1=C2C3=CC=CC=C3NC2=CC(=N1)N.CC(=O)O'; added: molecular_mass, monoisotopic_mass |
| 273,151 | consensus_match | altLabel | [] | [{"@value":"1-Methyl-2<em>H</em>-pyrido[4,3-<em>b</em>]indol-3(5<em>H</em>)-imine acetate","@language":"en","source":{"… | group_key=trp-p-2acetate||dimension=Environmental > media=Water > water_body=Unknown; cas=72254-58-1; added Common Chemistry CAS names as altLabel: 1-Methyl-2<em>H</em>-pyrido[4,3-<em>b</em>]indol-3(5<em>H</em>)-imine acetate, 3-Amino-1-methyl-5<em>H</em>-pyrido[4,3-<em>b</em>]indole acetate, 3-Amino-1-methyl-5<em>H</em>-pyrido[4,3-<em>b</em>]indole acetic acid salt, 5<em>H</em>-Pyrido[4,3-<em>b</em>]indol-3-amine, 1-methyl-, acetate (1:1), 5<em>H</em>-Pyrido[4,3-<em>b</em>]indol-3-amine, 1-methyl-, monoacetate; object_uuid=fo-5c78105c21696f2a |
| 273,152 | consensus_match | cas_match_labels | — | {"72254-58-1":"exactMatch"} | group_key=trp-p-2acetate||dimension=Environmental > media=Water > water_body=Unknown; group_sources=[]; cas_sources={'72254-58-1': []}; assigned CAS labels from group consensus; object_uuid=fo-5c78105c21696f2a: {'72254-58-1': 'exactMatch'} |
| 275,736 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-Methyl-2H-pyrido[4,3-b]indol-3(5H)-imine acetate' |
| 282,292 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | rdkit_post_consensus from 'CC(=O)O.Cc1[nH]c(=N)cc2[nH]c3ccccc3c12'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,388 | dedupe_altlabels | altLabel | [{"@value":"1-Methyl-2<em>H</em>-pyrido[4,3-<em>b</em>]indol-3(5<em>H</em>)-imine acetate","@language":"en","source":{"… | [{"@value":"1-Methyl-2H-pyrido[4,3-b]indol-3(5H)-imine acetate","@language":"en","source":{"prov:wasGeneratedBy":"conse… | Deduplicated altLabel values and removed entries matching prefLabel |
| 299,593 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… | associations resolved on the elementary layer |
| 390,077 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H15N3O2… | typed the way the ontology types it |
| 397,541 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/MolecularComplex"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/8230 | prefLabel | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v0 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v1 |
| ef:activity/change/20260821T1554374006150000/8231 | name | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v1 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v2 |
| ef:activity/change/20260821T1554374006150000/8232 | synonyms | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v2 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v3 |
| ef:activity/change/20260821T1554374006150000/37134 | context | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v3 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v4 |
| ef:activity/change/20260821T1554374006150000/37135 | context_iri | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v4 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v5 |
| ef:activity/change/20260821T1554374006150000/216079 | unit_iri | ef:agent/unit_normalization | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v5 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v6 |
| ef:activity/change/20260821T1554374006150000/223033 | prefLabel | ef:agent/normalize_name_case | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v6 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v7 |
| ef:activity/change/20260821T1554374006150000/235041 | properties | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v7 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v8 |
| ef:activity/change/20260821T1554374006150000/235042 | skos_definition | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v8 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v9 |
| ef:activity/change/20260821T1554374006150000/235043 | references | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v9 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v10 |
| ef:activity/change/20260821T1554374006150000/250571 | properties | ef:agent/rdkit_pre_consensus | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v10 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v11 |
| ef:activity/change/20260821T1554374006150000/273151 | altLabel | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v11 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v12 |
| ef:activity/change/20260821T1554374006150000/273152 | cas_match_labels | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v12 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v13 |
| ef:activity/change/20260821T1554374006150000/275736 | properties | ef:agent/opsin_iupac | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v13 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v14 |
| ef:activity/change/20260821T1554374006150000/282292 | properties | ef:agent/rdkit_post_consensus | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v14 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v15 |
| ef:activity/change/20260821T1554374006150000/292388 | altLabel | ef:agent/dedupe_altlabels | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v15 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v16 |
| ef:activity/change/20260821T1554374006150000/299593 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v16 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v17 |
| ef:activity/change/20260821T1554374006150000/390077 | properties | ef:agent/normalise_property_values | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v17 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v18 |
| ef:activity/change/20260821T1554374006150000/397541 | types | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v18 | ef:flow/08a91e70-3ddc-11dd-9a46-0050c2490048/v19 |