Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 77366' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=trifluoroaceticacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'76-05-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4ba22d0e82095fff: {'76-05-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['76-05-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_45892']; candidate_pubchem_cids=[6422, 84468, 22392675, 23138861]; selected_pubchem_cids=[6422]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
8,239 bootstrap_labels prefLabel [{"@value":"trifluoroacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… Bootstrapped prefLabel from legacy name field
8,240 bootstrap_labels name trifluoroacetic acid Purged legacy name field to enforce prefLabel usage
8,241 bootstrap_labels synonyms ["1,1,1-Trifluoroacetic acid","1w70","2,2,2-trifluoroacetic acid","A5711","AB1003241","AC1L1MHX","AC1Q71RR","AKOS000118… [] Removed legacy synonyms field in favor of structured labels
37,182 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
37,183 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
216,082 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,036 normalize_name_case prefLabel [{"@value":"trifluoroacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… [{"@value":"Trifluoroacetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
235,050 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
235,051 enrich_references skos_definition [{"@value":"A monocarboxylic acid that is the trifluoro derivative of acetic acid.","@language":"en","provenance":{"pro… Merged ChEBI/PubChem definitions into skos:definition
235,052 enrich_references references [] [{"@id":"gmelin:2729","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['76-05-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_45892']; candidate_pubchem_cids=[6422, 84468, 22392675, 23138861]; selected_pubchem_cids=[6422]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,574 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… rdkit_pre_consensus from 'C(=O)(C(F)(F)F)O'; added: monoisotopic_mass
255,519 chebi_altlabels altLabel [] [{"@value":"CF3COOH","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,946 consensus_match altLabel [{"@value":"CF3COOH","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"CF3COOH","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=trifluoroaceticacid||dimension=Environmental > media=Ground > geography=Agricultural; cas=76-05-1; added Common Chemistry CAS names as altLabel: 2,2,2-Trifluoroacetic acid, 57: PN: WO2025098440 SEQID: 147 sequence, Acetic acid, 2,2,2-trifluoro-, Acetic acid, trifluoro-, MeSH ID: D014269, NSC 77366, Trifluoroethanoic acid; object_uuid=fo-4ba22d0e82095fff
272,947 consensus_match cas_match_labels {"76-05-1":"exactMatch"} group_key=trifluoroaceticacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'76-05-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4ba22d0e82095fff: {'76-05-1': 'exactMatch'}
275,739 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Trifluoroacetic Acid'
282,295 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… rdkit_post_consensus from 'O=C(O)C(F)(F)F'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,948 strip_catalogue_altlabels altLabel [{"@value":"CF3COOH","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"CF3COOH","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Removed 1 catalogue altLabel value(s): 'NSC 77366' (registry code)
299,617 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,080 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2HF3O2"],… typed the way the ontology types it
397,544 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/8239 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v1
ef:activity/change/20260821T1302361922970000/8240 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v2
ef:activity/change/20260821T1302361922970000/8241 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v3
ef:activity/change/20260821T1302361922970000/37182 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v4
ef:activity/change/20260821T1302361922970000/37183 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v5
ef:activity/change/20260821T1302361922970000/216082 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v6
ef:activity/change/20260821T1302361922970000/223036 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v7
ef:activity/change/20260821T1302361922970000/235050 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v8
ef:activity/change/20260821T1302361922970000/235051 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v9
ef:activity/change/20260821T1302361922970000/235052 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v10
ef:activity/change/20260821T1302361922970000/250574 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v11
ef:activity/change/20260821T1302361922970000/255519 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v12
ef:activity/change/20260821T1302361922970000/272946 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v13
ef:activity/change/20260821T1302361922970000/272947 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v14
ef:activity/change/20260821T1302361922970000/275739 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v15
ef:activity/change/20260821T1302361922970000/282295 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v16
ef:activity/change/20260821T1302361922970000/288948 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v17
ef:activity/change/20260821T1302361922970000/299617 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v18
ef:activity/change/20260821T1302361922970000/390080 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v19
ef:activity/change/20260821T1302361922970000/397544 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-9a5e-0050c2490048/v20

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