Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'Arsenal 250A' (trade name)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=imazapyr||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'pubchem']; cas_sources={'81334-34-1': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1e0bba8e37ad2e32: {'81334-34-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['81334-34-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82021']; candidate_pubchem_cids=[54738]; selected_pubchem_cids=[54738]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
8,244 bootstrap_labels prefLabel [{"@value":"imazapyr","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
8,245 bootstrap_labels name imazapyr Purged legacy name field to enforce prefLabel usage
8,246 bootstrap_labels synonyms ["(+-)-Imazapyr","2-(4,5-Dihydro-4-methyl-4-(1-methylethyl)-5-oxo-1H-imidazol-2-yl)-3-pyridinecarboxylic acid","2-(4-Is… [] Removed legacy synonyms field in favor of structured labels
37,206 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
37,207 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
216,089 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,043 normalize_name_case prefLabel [{"@value":"imazapyr","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Imazapyr","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
235,061 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
235,062 enrich_references skos_definition [{"@value":"A racemate comprising equimolar amounts of (R)- and (S)-imazapyr. An inhibitor of acetohydroxyacid synthase… Merged ChEBI/PubChem definitions into skos:definition
235,063 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J43.085D","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['81334-34-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82021']; candidate_pubchem_cids=[54738]; selected_pubchem_cids=[54738]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,583 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… rdkit_pre_consensus from 'CC(C)C1(C(=O)NC(=N1)C2=C(C=CC=N2)C(=O)O)C'; added: molecular_mass, monoisotopic_mass
255,529 chebi_altlabels altLabel [] [{"@value":"(+-)-2-(4-isopropyl-4-methyl-5-oxo-2-iidazolin-2-yl)nicotinic acid","@language":"en","source":{"prov:wasGen… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,951 consensus_match altLabel [{"@value":"(+-)-2-(4-isopropyl-4-methyl-5-oxo-2-iidazolin-2-yl)nicotinic acid","@language":"en","source":{"prov:wasGen… [{"@value":"(+-)-2-(4-isopropyl-4-methyl-5-oxo-2-iidazolin-2-yl)nicotinic acid","@language":"en","source":{"prov:wasGen… group_key=imazapyr||dimension=Environmental > media=Water > water_body=Surface water; cas=81334-34-1; added Common Chemistry CAS names as altLabel: (±)-Imazapyr, 2-(4-Isopropyl-4-methyl-5-oxo-2-imidazolin-2-yl)nicotinic acid, 2-(4-Isopropyl-4-methyl-5-oxo-4,5-dihydro-1<em>H</em>-imidazol-2-yl)-nicotinic acid, 3-Pyridinecarboxylic acid, 2-[4,5-dihydro-4-methyl-4-(1-methylethyl)-5-oxo-1<em>H</em>-imidazol-2-yl]-, AC 243997, Arsenal 250A, Charper, Chopper, Clearsol DF, Powerline; object_uuid=fo-1e0bba8e37ad2e32
267,952 consensus_match cas_match_labels {"81334-34-1":"exactMatch"} group_key=imazapyr||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'pubchem']; cas_sources={'81334-34-1': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1e0bba8e37ad2e32: {'81334-34-1': 'exactMatch'}
275,761 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-[(RS)-4-isopropyl-4-methyl-5-oxo-2-imidazolin-2-yl]nicotinic acid'
282,316 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… rdkit_post_consensus from 'CC(C)C1(C)N=C(c2ncccc2C(=O)O)NC1=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,970 strip_catalogue_altlabels altLabel [{"@value":"(+-)-2-(4-isopropyl-4-methyl-5-oxo-2-iidazolin-2-yl)nicotinic acid","@language":"en","source":{"prov:wasGen… [{"@value":"(+-)-2-(4-isopropyl-4-methyl-5-oxo-2-iidazolin-2-yl)nicotinic acid","@language":"en","source":{"prov:wasGen… Removed 1 catalogue altLabel value(s): 'Arsenal 250A' (trade name)
299,649 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,104 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H15N3O3… typed the way the ontology types it
397,570 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
397,571 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/8244 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v1
ef:activity/change/20260820T1416470405690000/8245 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v2
ef:activity/change/20260820T1416470405690000/8246 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v3
ef:activity/change/20260820T1416470405690000/37206 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v4
ef:activity/change/20260820T1416470405690000/37207 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v5
ef:activity/change/20260820T1416470405690000/216089 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v6
ef:activity/change/20260820T1416470405690000/223043 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v7
ef:activity/change/20260820T1416470405690000/235061 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v8
ef:activity/change/20260820T1416470405690000/235062 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v9
ef:activity/change/20260820T1416470405690000/235063 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v10
ef:activity/change/20260820T1416470405690000/250583 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v11
ef:activity/change/20260820T1416470405690000/255529 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v12
ef:activity/change/20260820T1416470405690000/267951 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v13
ef:activity/change/20260820T1416470405690000/267952 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v14
ef:activity/change/20260820T1416470405690000/275761 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v15
ef:activity/change/20260820T1416470405690000/282316 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v16
ef:activity/change/20260820T1416470405690000/288970 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v17
ef:activity/change/20260820T1416470405690000/299649 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v18
ef:activity/change/20260820T1416470405690000/390104 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v19
ef:activity/change/20260820T1416470405690000/397570 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v20
ef:activity/change/20260820T1416470405690000/397571 roles ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-9a67-0050c2490048/v21

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