Mirex
Everything that changed this flow. Back to the flow
08a91e70-3ddc-11dd-9ad6-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 7 catalogue altLabel value(s): 'CG-1283' (grade code), 'Dechlorane 4070' (trade name), 'ENT 25719' (grade code), 'GC 1283' (grade code), 'NSC 124102' (registry code), 'NSC 26107' (registry code), 'NSC 37656' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=mirex||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2385-85-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f934befcb4fddcde: {'2385-85-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['2385-85-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34852']; candidate_pubchem_cids=[16945]; selected_pubchem_cids=[16945]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 8,301 | bootstrap_labels | prefLabel | — | [{"@value":"mirex","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… | Bootstrapped prefLabel from legacy name field |
| 8,302 | bootstrap_labels | name | mirex | — | Purged legacy name field to enforce prefLabel usage |
| 8,303 | bootstrap_labels | synonyms | ["1,1a,2,2,3,3a,4,5,5,5a,5b,6-Dodecachloro-octahydro-1,3,4-metheno-1H-cyclobuta[cd]pentalene","1,1a,2,2,3,3a,4,5,5,5a,5… | [] | Removed legacy synonyms field in favor of structured labels |
| 37,428 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 37,429 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 216,108 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,058 | normalize_name_case | prefLabel | [{"@value":"mirex","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… | [{"@value":"Mirex","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 235,118 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 235,119 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 235,120 | enrich_references | references | [] | [{"@id":"gmelin:1789502","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"co… | Added references with provenance; cas_numbers=['2385-85-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34852']; candidate_pubchem_cids=[16945]; selected_pubchem_cids=[16945]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,599 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | rdkit_pre_consensus from 'C12(C3(C4(C5(C3(C(C1(C5(C2(C4(Cl)Cl)Cl)Cl)Cl)(Cl)Cl)Cl)Cl)Cl)Cl)Cl'; added: monoisotopic_mass |
| 255,542 | chebi_altlabels | altLabel | [] | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b,6-dodecachlorooctahydro-1H-1,3,4-(methanetriyl)cyclobuta[cd]pentalene","@language… | Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 269,038 | consensus_match | altLabel | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b,6-dodecachlorooctahydro-1H-1,3,4-(methanetriyl)cyclobuta[cd]pentalene","@language… | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b,6-dodecachlorooctahydro-1H-1,3,4-(methanetriyl)cyclobuta[cd]pentalene","@language… | group_key=mirex||dimension=Environmental > media=Ground > geography=Agricultural; cas=2385-85-5; added Common Chemistry CAS names as altLabel: 1,1a,2,2,3,3a,4,5,5,5a,5b,6-Dodecachlorooctahydro-1,3,4-metheno-1<em>H</em>-cyclobuta[<em>cd</em>]pentalene, 1,3,4-Metheno-1<em>H</em>-cyclobuta[<em>cd</em>]pentalene, 1,1a,2,2,3,3a,4,5,5,5a,5b,6-dodecachlorooctahydro-, 1,3,4-Metheno-1<em>H</em>-cyclobuta[<em>cd</em>]pentalene, dodecachlorooctahydro-, 1,3-Cyclopentadiene, 1,2,3,4,5,5-hexachloro-, dimer, Dechlorane 4070, Dodecachlor, Dodecaclor, ENT 25719, GC 1283, Hexachlorocyclopentadiene dimer, MeSH ID: D008917, NSC 124102, NSC 26107, NSC 37656, Paramex, Perchlorodecone, Perchloropentacyclo[5.2.1.0<sup>2,6</sup>.0<sup>3,9</sup>.0<sup>5,8</sup>]decane, Perchloropentacyclo[5.3.0.0<sup>2,6</sup>.0<sup>3,9</sup>.0<sup>4,8</sup>]decane; object_uuid=fo-f934befcb4fddcde |
| 269,039 | consensus_match | cas_match_labels | — | {"2385-85-5":"exactMatch"} | group_key=mirex||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2385-85-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f934befcb4fddcde: {'2385-85-5': 'exactMatch'} |
| 275,782 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,2,3,4,5,5,6,7,8,9,10,10-dodecachloropentacyclo[5.3.0.0(2,6).0(3,9).0(4,8)]decane' |
| 282,337 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | rdkit_post_consensus from 'ClC1(Cl)C2(Cl)C3(Cl)C4(Cl)C(Cl)(Cl)C5(Cl)C3(Cl)C1(Cl)C5(Cl)C24Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,986 | strip_catalogue_altlabels | altLabel | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b,6-dodecachlorooctahydro-1H-1,3,4-(methanetriyl)cyclobuta[cd]pentalene","@language… | [{"@value":"1,1a,2,2,3,3a,4,5,5,5a,5b,6-dodecachlorooctahydro-1H-1,3,4-(methanetriyl)cyclobuta[cd]pentalene","@language… | Removed 7 catalogue altLabel value(s): 'CG-1283' (grade code), 'Dechlorane 4070' (trade name), 'ENT 25719' (grade code), 'GC 1283' (grade code), 'NSC 124102' (registry code), 'NSC 26107' (registry code), 'NSC 37656' (registry code) |
| 299,762 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… | associations resolved on the elementary layer |
| 390,125 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10Cl12"],… | typed the way the ontology types it |
| 397,600 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 397,601 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1555490862250000/8301 | prefLabel | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v0 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v1 |
| ef:activity/change/20260820T1555490862250000/8302 | name | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v1 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v2 |
| ef:activity/change/20260820T1555490862250000/8303 | synonyms | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v2 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v3 |
| ef:activity/change/20260820T1555490862250000/37428 | context | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v3 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v4 |
| ef:activity/change/20260820T1555490862250000/37429 | context_iri | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v4 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v5 |
| ef:activity/change/20260820T1555490862250000/216108 | unit_iri | ef:agent/unit_normalization | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v5 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v6 |
| ef:activity/change/20260820T1555490862250000/223058 | prefLabel | ef:agent/normalize_name_case | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v6 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v7 |
| ef:activity/change/20260820T1555490862250000/235118 | properties | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v7 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v8 |
| ef:activity/change/20260820T1555490862250000/235119 | skos_definition | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v8 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v9 |
| ef:activity/change/20260820T1555490862250000/235120 | references | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v9 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v10 |
| ef:activity/change/20260820T1555490862250000/250599 | properties | ef:agent/rdkit_pre_consensus | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v10 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v11 |
| ef:activity/change/20260820T1555490862250000/255542 | altLabel | ef:agent/chebi_altlabels | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v11 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v12 |
| ef:activity/change/20260820T1555490862250000/269038 | altLabel | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v12 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v13 |
| ef:activity/change/20260820T1555490862250000/269039 | cas_match_labels | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v13 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v14 |
| ef:activity/change/20260820T1555490862250000/275782 | properties | ef:agent/opsin_iupac | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v14 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v15 |
| ef:activity/change/20260820T1555490862250000/282337 | properties | ef:agent/rdkit_post_consensus | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v15 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v16 |
| ef:activity/change/20260820T1555490862250000/288986 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v16 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v17 |
| ef:activity/change/20260820T1555490862250000/299762 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v17 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v18 |
| ef:activity/change/20260820T1555490862250000/390125 | properties | ef:agent/normalise_property_values | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v18 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v19 |
| ef:activity/change/20260820T1555490862250000/397600 | types | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v19 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v20 |
| ef:activity/change/20260820T1555490862250000/397601 | roles | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v20 | ef:flow/08a91e70-3ddc-11dd-9ad6-0050c2490048/v21 |