Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 57197' (registry code), 'NSC 623438' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=caffeicacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'331-39-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d26e564bbd9a372d: {'331-39-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['331-39-5']; matched_chebi_ids=[]; candidate_pubchem_cids=[2518, 5429, 689043, 1549111]; selected_pubchem_cids=[2518]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
3,622 bootstrap_labels prefLabel [{"@value":"caffeic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
3,623 bootstrap_labels name caffeic acid Purged legacy name field to enforce prefLabel usage
3,624 bootstrap_labels synonyms ["(2E)-3-(3,4-Dihydroxyphenyl)-2-propenoic acid","(2E)-3-(3,4-dihydroxyphenyl)acrylic acid","(2E)-3-(3,4-dihydroxypheny… [] Removed legacy synonyms field in favor of structured labels
37,694 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
37,695 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
214,548 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,937 normalize_name_case prefLabel [{"@value":"caffeic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Caffeic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,677 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1, commonchemistry_cas=['331-39-5'])
230,678 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
230,679 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=331-39-5","provenance":{"prov:wasGeneratedBy":"enrich_references… Added references with provenance; cas_numbers=['331-39-5']; matched_chebi_ids=[]; candidate_pubchem_cids=[2518, 5429, 689043, 1549111]; selected_pubchem_cids=[2518]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,326 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… rdkit_pre_consensus from 'C1=CC(=C(C=C1C=CC(=O)O)O)O'; added: molecular_mass, monoisotopic_mass
254,845 chebi_altlabels altLabel [] [{"@value":"(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… Added 9 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s)
264,743 consensus_match altLabel [{"@value":"(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… [{"@value":"(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… group_key=caffeicacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=331-39-5; added Common Chemistry CAS names as altLabel: 2-Propenoic acid, 3-(3,4-dihydroxyphenyl)-, 3,4-Dihydroxybenzeneacrylic acid, 3,4-Dihydroxycinammic acid, 3-(3,4-Dihydroxyphenyl)-2-propenoic acid, 3-(3,4-Dihydroxyphenyl)propenoic acid, 4-(2-Carboxyethenyl)-1,2-dihydroxybenzene, 4-(2′-Carboxyvinyl)-1,2-dihydroxybenzene, Cinnamic acid, 3,4-dihydroxy-, DHCA, NSC 57197, NSC 623438; object_uuid=fo-d26e564bbd9a372d
264,744 consensus_match cas_match_labels {"331-39-5":"exactMatch"} group_key=caffeicacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'331-39-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d26e564bbd9a372d: {'331-39-5': 'exactMatch'}
274,455 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3,4-Dihydroxycinnamic acid'
280,895 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… rdkit_post_consensus from 'O=C(O)C=Cc1ccc(O)c(O)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,002 strip_catalogue_altlabels altLabel [{"@value":"(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… [{"@value":"(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… Removed 2 catalogue altLabel value(s): 'NSC 57197' (registry code), 'NSC 623438' (registry code)
299,872 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
388,752 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O4"],"… typed the way the ontology types it
395,620 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/3622 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v1
ef:activity/change/20260821T1554374006150000/3623 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v2
ef:activity/change/20260821T1554374006150000/3624 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v3
ef:activity/change/20260821T1554374006150000/37694 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v4
ef:activity/change/20260821T1554374006150000/37695 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v5
ef:activity/change/20260821T1554374006150000/214548 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v6
ef:activity/change/20260821T1554374006150000/221937 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v7
ef:activity/change/20260821T1554374006150000/230677 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v8
ef:activity/change/20260821T1554374006150000/230678 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v9
ef:activity/change/20260821T1554374006150000/230679 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v10
ef:activity/change/20260821T1554374006150000/249326 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v11
ef:activity/change/20260821T1554374006150000/254845 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v12
ef:activity/change/20260821T1554374006150000/264743 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v13
ef:activity/change/20260821T1554374006150000/264744 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v14
ef:activity/change/20260821T1554374006150000/274455 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v15
ef:activity/change/20260821T1554374006150000/280895 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v16
ef:activity/change/20260821T1554374006150000/288002 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v17
ef:activity/change/20260821T1554374006150000/299872 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v18
ef:activity/change/20260821T1554374006150000/388752 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v19
ef:activity/change/20260821T1554374006150000/395620 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-9b5e-0050c2490048/v20

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