Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'NSC 36324' (registry code), 'PBQ 2' (grade code), 'RS 404' (grade code), 'TR 9005' (grade code)
cas_match_labels 1 consensus_match group_key=1,4-benzoquinone||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-51-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f5312188a86dfdba: {'106-51-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['106-51-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16509']; candidate_pubchem_cids=[4650, 12511, 2778761, 20034093]; selected_pubchem_cids=[4650]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
8,534 bootstrap_labels prefLabel [{"@value":"1,4-benzoquinone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
8,535 bootstrap_labels name 1,4-benzoquinone Purged legacy name field to enforce prefLabel usage
8,536 bootstrap_labels synonyms ["1,4-Benzochinon","1,4-Benzoquine","1,4-Cyclohexadiene dioxide","1,4-Cyclohexadienedione","1,4-Diossibenzene","1,4-Dio… [] Removed legacy synonyms field in favor of structured labels
38,588 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
38,589 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
216,180 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
235,339 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
235,340 enrich_references skos_definition [{"@value":"The simplest member of the class of 1,4-benzoquinones, obtained by the formal oxidation of hydroquinone to… Merged ChEBI/PubChem definitions into skos:definition
235,341 enrich_references references [] [{"@id":"gmelin:2741","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['106-51-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16509']; candidate_pubchem_cids=[4650, 12511, 2778761, 20034093]; selected_pubchem_cids=[4650]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,664 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… rdkit_pre_consensus from 'C1=CC(=O)C=CC1=O'; added: monoisotopic_mass
255,577 chebi_altlabels altLabel [] [{"@value":"1,4-Benzochinon","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
258,640 consensus_match altLabel [{"@value":"1,4-Benzochinon","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"1,4-Benzochinon","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… group_key=1,4-benzoquinone||dimension=Environmental > media=Ground > geography=Agricultural; cas=106-51-4; added Common Chemistry CAS names as altLabel: 1,4-Cyclohexadienedione, Chinone, Inhibitor PBQ, NSC 36324, PBQ, PBQ 2, RS 404, Stearer PBQ, TR 9005; object_uuid=fo-f5312188a86dfdba
258,641 consensus_match cas_match_labels {"106-51-4":"exactMatch"} group_key=1,4-benzoquinone||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-51-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f5312188a86dfdba: {'106-51-4': 'exactMatch'}
275,827 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,4-benzoquinone'
282,385 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… rdkit_post_consensus from 'O=C1C=CC(=O)C=C1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,010 strip_catalogue_altlabels altLabel [{"@value":"1,4-Benzochinon","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"1,4-Benzochinon","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Removed 4 catalogue altLabel value(s): 'NSC 36324' (registry code), 'PBQ 2' (grade code), 'RS 404' (grade code), 'TR 9005' (grade code)
300,312 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,164 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4O2"],"… typed the way the ontology types it
397,663 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/8534 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v1
ef:activity/change/20260820T1812399309960000/8535 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v2
ef:activity/change/20260820T1812399309960000/8536 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v3
ef:activity/change/20260820T1812399309960000/38588 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v4
ef:activity/change/20260820T1812399309960000/38589 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v5
ef:activity/change/20260820T1812399309960000/216180 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v6
ef:activity/change/20260820T1812399309960000/235339 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v7
ef:activity/change/20260820T1812399309960000/235340 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v8
ef:activity/change/20260820T1812399309960000/235341 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v9
ef:activity/change/20260820T1812399309960000/250664 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v10
ef:activity/change/20260820T1812399309960000/255577 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v11
ef:activity/change/20260820T1812399309960000/258640 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v12
ef:activity/change/20260820T1812399309960000/258641 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v13
ef:activity/change/20260820T1812399309960000/275827 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v14
ef:activity/change/20260820T1812399309960000/282385 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v15
ef:activity/change/20260820T1812399309960000/289010 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v16
ef:activity/change/20260820T1812399309960000/300312 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v17
ef:activity/change/20260820T1812399309960000/390164 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v18
ef:activity/change/20260820T1812399309960000/397663 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9d1d-0050c2490048/v19

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