Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, normalize_name_case, substance_label_v1 the substance's name: Chromium(3+)
cas_match_labels 1 consensus_match group_key=chromium(iii)||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'16065-83-1': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cc41dd8cd4558176: {'16065-83-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['16065-83-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_49544']; candidate_pubchem_cids=[23976, 27668]; selected_pubchem_cids=[27668]; formula_similarity_expected=['Cr']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
8,770 bootstrap_labels prefLabel [{"@value":"chromium (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Bootstrapped prefLabel from legacy name field
8,771 bootstrap_labels name chromium (iii) Purged legacy name field to enforce prefLabel usage
8,772 bootstrap_labels synonyms ["AC1L1DPD","CHROMIUM (III)","CR+3","Chromic ion","Chromium (3+)","Chromium (III) ion","Chromium (III), insoluble salts… [] Removed legacy synonyms field in favor of structured labels
39,790 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
39,791 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
216,263 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,165 normalize_name_case prefLabel [{"@value":"chromium (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… [{"@value":"Chromium (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
235,574 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
235,575 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
235,576 enrich_references references [] [{"@id":"gmelin:15996","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['16065-83-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_49544']; candidate_pubchem_cids=[23976, 27668]; selected_pubchem_cids=[27668]; formula_similarity_expected=['Cr']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,738 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… rdkit_pre_consensus from '[Cr+3]'; added: monoisotopic_mass
255,629 chebi_altlabels altLabel [] [{"@value":"CHROMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,164 consensus_match altLabel [{"@value":"CHROMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"CHROMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… group_key=chromium(iii)||dimension=Environmental > media=Ground > geography=Agricultural; cas=16065-83-1; added Common Chemistry CAS names as altLabel: Chromium (Cr<sup>3+</sup>), Chromium ion(3+), Chromium, ion (Cr<sup>3+</sup>), Cr<sup>3+</sup>; object_uuid=fo-cc41dd8cd4558176
265,165 consensus_match cas_match_labels {"16065-83-1":"exactMatch"} group_key=chromium(iii)||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'16065-83-1': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cc41dd8cd4558176: {'16065-83-1': 'exactMatch'}
275,919 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Chromium (iii)'
282,486 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… rdkit_post_consensus from '[Cr+3]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,434 dedupe_altlabels altLabel [{"@value":"CHROMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"CHROMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Deduplicated altLabel values and removed entries matching prefLabel
300,940 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,268 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… typed the way the ontology types it
397,797 link_flows_to_their_substance types ["https://w3id.org/chemrof/AtomCation"] the substance's answer, copied onto its flow
397,798 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow
397,799 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cr","Cr+3"… the substance's answer, copied onto its flow
403,908 substance_label_v1 prefLabel [{"@value":"Chromium (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… [{"@value":"Chromium(3+)","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"substance_label_v1","prov:wasA… the substance's name: Chromium(3+)

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/8770 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/8771 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/8772 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/39790 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/39791 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/216263 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/223165 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/235574 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/235575 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/235576 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/250738 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/255629 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/265164 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/265165 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/275919 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/282486 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/292434 altLabel ef:agent/dedupe_altlabels ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/300940 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/390268 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/397797 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/397798 roles ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v21
ef:activity/change/20260820T0738569779880000/397799 properties ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v21 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v22
ef:activity/change/20260820T0738569779880000/403908 prefLabel ef:agent/substance_label_v1 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v22 ef:flow/08a91e70-3ddc-11dd-9f7a-0050c2490048/v23

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