Ethionine
Everything that changed this flow. Back to the flow
08a91e70-3ddc-11dd-9f99-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 82393' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=ethionine||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13073-35-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6eb901fc80443c54: {'13073-35-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 235-966-4 from CAS 13073-35-3 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['13073-35-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_4886']; candidate_pubchem_cids=[6205, 25674, 6992071]; selected_pubchem_cids=[25674]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 8,789 | bootstrap_labels | prefLabel | — | [{"@value":"ethionine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Bootstrapped prefLabel from legacy name field |
| 8,790 | bootstrap_labels | name | ethionine | — | Purged legacy name field to enforce prefLabel usage |
| 8,791 | bootstrap_labels | synonyms | ["(+-)-Ethionine","2-Amino-4-(ethylthio)butyric acid","2-amino-4-ethylsulfanylbutanoic acid","4-ETHYL THIOBUTYRIC ACID"… | [] | Removed legacy synonyms field in favor of structured labels |
| 39,846 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 39,847 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 216,264 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,164 | normalize_name_case | prefLabel | [{"@value":"ethionine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Ethionine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 226,904 | ec_cross_check | ec_numbers | [] | ["235-966-4"] | Resolved from EC-inventory: 235-966-4 from CAS 13073-35-3 |
| 235,587 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 235,588 | enrich_references | skos_definition | — | [{"@value":"An S-ethylhomocysteine that has S-configuration at the chiral centre.","@language":"en","provenance":{"prov… | Merged ChEBI/PubChem definitions into skos:definition |
| 235,589 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J9.260F","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['13073-35-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_4886']; candidate_pubchem_cids=[6205, 25674, 6992071]; selected_pubchem_cids=[25674]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,735 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | rdkit_pre_consensus from 'CCSCCC(C(=O)O)N'; added: inchi2d_string |
| 255,626 | chebi_altlabels | altLabel | [] | [{"@value":"(+)-S-ethyl-L-homocysteine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 266,782 | consensus_match | altLabel | [{"@value":"(+)-S-ethyl-L-homocysteine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… | [{"@value":"(+)-S-ethyl-L-homocysteine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… | group_key=ethionine||dimension=Environmental > media=Ground > geography=Unknown; cas=13073-35-3; added Common Chemistry CAS names as altLabel: (2S)-2-Azaniumyl-4-ethylsulfanylbutanoate, <em>S</em>-Ethylhomocysteine, <span class="text-smallcaps">L</span>-Ethionine, <span class="text-smallcaps">L</span>-Homocysteine, <em>S</em>-ethyl-, Butanoic acid, 2-amino-4-(ethylthio)-, (<em>S</em>)-, Butyric acid, 2-amino-4-(ethylthio)-, <span class="text-smallcaps">L</span>-, ETH, NSC 82393; object_uuid=fo-6eb901fc80443c54 |
| 266,783 | consensus_match | cas_match_labels | — | {"13073-35-3":"exactMatch"} | group_key=ethionine||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13073-35-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6eb901fc80443c54: {'13073-35-3': 'exactMatch'} |
| 275,905 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Ethionine' |
| 282,473 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | rdkit_post_consensus from 'CCSCC[C@H](N)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,084 | strip_catalogue_altlabels | altLabel | [{"@value":"(+)-S-ethyl-L-homocysteine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… | [{"@value":"(+)-S-ethyl-L-homocysteine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… | Removed 1 catalogue altLabel value(s): 'NSC 82393' (registry code) |
| 300,948 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… | associations resolved on the elementary layer |
| 390,252 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | typed the way the ontology types it |
| 397,781 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 397,782 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H13NO2S"… | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/8789 | prefLabel | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v0 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v1 |
| ef:activity/change/20260822T0600486828500000/8790 | name | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v1 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v2 |
| ef:activity/change/20260822T0600486828500000/8791 | synonyms | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v2 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v3 |
| ef:activity/change/20260822T0600486828500000/39846 | context | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v3 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v4 |
| ef:activity/change/20260822T0600486828500000/39847 | context_iri | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v4 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v5 |
| ef:activity/change/20260822T0600486828500000/216264 | unit_iri | ef:agent/unit_normalization | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v5 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v6 |
| ef:activity/change/20260822T0600486828500000/223164 | prefLabel | ef:agent/normalize_name_case | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v6 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v7 |
| ef:activity/change/20260822T0600486828500000/226904 | ec_numbers | ef:agent/ec_cross_check | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v7 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v8 |
| ef:activity/change/20260822T0600486828500000/235587 | properties | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v8 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v9 |
| ef:activity/change/20260822T0600486828500000/235588 | skos_definition | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v9 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v10 |
| ef:activity/change/20260822T0600486828500000/235589 | references | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v10 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v11 |
| ef:activity/change/20260822T0600486828500000/250735 | properties | ef:agent/rdkit_pre_consensus | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v11 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v12 |
| ef:activity/change/20260822T0600486828500000/255626 | altLabel | ef:agent/chebi_altlabels | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v12 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v13 |
| ef:activity/change/20260822T0600486828500000/266782 | altLabel | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v13 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v14 |
| ef:activity/change/20260822T0600486828500000/266783 | cas_match_labels | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v14 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v15 |
| ef:activity/change/20260822T0600486828500000/275905 | properties | ef:agent/opsin_iupac | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v15 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v16 |
| ef:activity/change/20260822T0600486828500000/282473 | properties | ef:agent/rdkit_post_consensus | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v16 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v17 |
| ef:activity/change/20260822T0600486828500000/289084 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v17 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v18 |
| ef:activity/change/20260822T0600486828500000/300948 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v18 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v19 |
| ef:activity/change/20260822T0600486828500000/390252 | properties | ef:agent/normalise_property_values | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v19 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v20 |
| ef:activity/change/20260822T0600486828500000/397781 | types | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v20 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v21 |
| ef:activity/change/20260822T0600486828500000/397782 | properties | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v21 | ef:flow/08a91e70-3ddc-11dd-9f99-0050c2490048/v22 |