Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'EPN 300' (grade code), 'NSC 404840' (registry code), 'NSC 8943' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=ethylo-(p-nitrophenyl)phenylphosphonothionate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'2104-64-5': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-34e0c5242a83eb7b: {'2104-64-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['2104-64-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34733']; candidate_pubchem_cids=[16421, 15764013, 18769160, 73011796]; selected_pubchem_cids=[16421]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
8,803 bootstrap_labels prefLabel [{"@value":"ethyl o-(p-nitrophenyl) phenylphosphonothionate","@language":"en","source":{"prov:wasGeneratedBy":"bootstra… Bootstrapped prefLabel from legacy name field
8,804 bootstrap_labels name ethyl o-(p-nitrophenyl) phenylphosphonothionate Purged legacy name field to enforce prefLabel usage
8,805 bootstrap_labels synonyms ["(+)-EPN","(-)-EPN","AC1L27X0","Benzenephosphonic acid, thiono-, ethyl-(p-nitrophenyl) ester","Benzenephosphonic acid,… [] Removed legacy synonyms field in favor of structured labels
39,922 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
39,923 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
216,274 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,174 normalize_name_case prefLabel [{"@value":"ethyl o-(p-nitrophenyl) phenylphosphonothionate","@language":"en","source":{"prov:wasGeneratedBy":"bootstra… [{"@value":"Ethyl O-(p-nitrophenyl) Phenylphosphonothionate","@language":"en","source":{"prov:wasGeneratedBy":"bootstra… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
235,607 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
235,608 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
235,609 enrich_references references [] [{"@id":"beilstein:2542580","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['2104-64-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34733']; candidate_pubchem_cids=[16421, 15764013, 18769160, 73011796]; selected_pubchem_cids=[16421]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,747 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… rdkit_pre_consensus from 'CCOP(=S)(C1=CC=CC=C1)OC2=CC=C(C=C2)[N+](=O)[O-]'; added: monoisotopic_mass
255,638 chebi_altlabels altLabel [] [{"@value":"EPN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
266,928 consensus_match altLabel [{"@value":"EPN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"EPN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… group_key=ethylo-(p-nitrophenyl)phenylphosphonothionate||dimension=Environmental > media=Ground > geography=Agricultural; cas=2104-64-5; added Common Chemistry CAS names as altLabel: <em>O</em>-Ethyl <em>O</em>-(4-nitrophenyl) benzenethionophosphonate, <em>O</em>-Ethyl <em>O</em>-<em>p</em>-nitrophenyl benzenethiophosphonate, EPN 300, NSC 404840, NSC 8943, Phosphonothioic acid, <em>P</em>-phenyl-, <em>O</em>-ethyl <em>O</em>-(4-nitrophenyl) ester, Phosphonothioic acid, phenyl-, <em>O</em>-ethyl <em>O</em>-(4-nitrophenyl) ester, Phosphonothioic acid, phenyl-, <em>O</em>-ethyl <em>O</em>-(<em>p</em>-nitrophenyl) ester, Phosphonothioic acid, phenyl-, ethyl <em>p</em>-nitrophenyl ester, Santox; object_uuid=fo-34e0c5242a83eb7b
266,929 consensus_match cas_match_labels {"2104-64-5":"exactMatch"} group_key=ethylo-(p-nitrophenyl)phenylphosphonothionate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'2104-64-5': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-34e0c5242a83eb7b: {'2104-64-5': 'exactMatch'}
275,930 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'O-ethyl O-(4-nitrophenyl) phenylphosphonothioate'
282,497 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… rdkit_post_consensus from 'CCOP(=S)(Oc1ccc([N+](=O)[O-])cc1)c1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,108 strip_catalogue_altlabels altLabel [{"@value":"EPN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"EPN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Removed 3 catalogue altLabel value(s): 'EPN 300' (grade code), 'NSC 404840' (registry code), 'NSC 8943' (registry code)
301,006 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,279 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H14NO4P… typed the way the ontology types it
397,811 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
397,812 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/8803 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v1
ef:activity/change/20260820T1416470405690000/8804 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v2
ef:activity/change/20260820T1416470405690000/8805 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v3
ef:activity/change/20260820T1416470405690000/39922 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v4
ef:activity/change/20260820T1416470405690000/39923 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v5
ef:activity/change/20260820T1416470405690000/216274 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v6
ef:activity/change/20260820T1416470405690000/223174 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v7
ef:activity/change/20260820T1416470405690000/235607 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v8
ef:activity/change/20260820T1416470405690000/235608 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v9
ef:activity/change/20260820T1416470405690000/235609 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v10
ef:activity/change/20260820T1416470405690000/250747 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v11
ef:activity/change/20260820T1416470405690000/255638 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v12
ef:activity/change/20260820T1416470405690000/266928 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v13
ef:activity/change/20260820T1416470405690000/266929 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v14
ef:activity/change/20260820T1416470405690000/275930 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v15
ef:activity/change/20260820T1416470405690000/282497 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v16
ef:activity/change/20260820T1416470405690000/289108 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v17
ef:activity/change/20260820T1416470405690000/301006 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v18
ef:activity/change/20260820T1416470405690000/390279 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v19
ef:activity/change/20260820T1416470405690000/397811 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v20
ef:activity/change/20260820T1416470405690000/397812 roles ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-9fbc-0050c2490048/v21

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