Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NGX 4010' (grade code), 'NSC 56353' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=capsaicin||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'404-86-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4b18c4a8ccebc7c0: {'404-86-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['404-86-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3374']; candidate_pubchem_cids=[2548, 1548943, 53384941, 57369257]; selected_pubchem_cids=[1548943]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
3,696 bootstrap_labels prefLabel [{"@value":"capsaicin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
3,697 bootstrap_labels name capsaicin Purged legacy name field to enforce prefLabel usage
3,698 bootstrap_labels synonyms ["(6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide","(6E)-N-{[4-hydroxy-3-(methyloxy)phenyl]methyl}-8-methylnon… [] Removed legacy synonyms field in favor of structured labels
40,158 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
40,159 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
214,575 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,950 normalize_name_case prefLabel [{"@value":"capsaicin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Capsaicin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,743 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,744 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
230,745 enrich_references references [] [{"@id":"beilstein:2816484","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['404-86-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3374']; candidate_pubchem_cids=[2548, 1548943, 53384941, 57369257]; selected_pubchem_cids=[1548943]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,346 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… rdkit_pre_consensus from 'CC(C)/C=C/CCCCC(=O)NCC1=CC(=C(C=C1)O)OC'; added: monoisotopic_mass
254,853 chebi_altlabels altLabel [] [{"@value":"(6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide","@language":"en","source":{"prov:wasGeneratedBy":… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,828 consensus_match altLabel [{"@value":"(6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide","@language":"en","source":{"prov:wasGeneratedBy":… [{"@value":"(6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide","@language":"en","source":{"prov:wasGeneratedBy":… group_key=capsaicin||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=404-86-4; added Common Chemistry CAS names as altLabel: (6<em>E</em>)-<em>N</em>-[(4-Hydroxy-3-methoxyphenyl)methyl]-8-methyl-6-nonenamide, (<em>E</em>)-<em>N</em>-(4-Hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide, 6-Nonenamide, 8-methyl-<em>N</em>-vanillyl-, (<em>E</em>)-, 6-Nonenamide, <em>N</em>-[(4-hydroxy-3-methoxyphenyl)methyl]-8-methyl-, (6<em>E</em>)-, 6-Nonenamide, <em>N</em>-[(4-hydroxy-3-methoxyphenyl)methyl]-8-methyl-, (<em>E</em>)-, <em>E</em>-Capsaicin, <em>N</em>-(4-Oxy-3-methoxybenzyl)-8-methyl-6-nonenamide, ALGRX 4975, Adlea, Ausanil, Axsain, Capsaicine, Capsicin, Capsin P 50, Capzasin-HP, Chilli Orange, Dolenon, MeSH ID: D002211, Mioton, NGX 4010, NSC 56353, Ovocap, Qutenza, Ratden PE 40, Togarashi Orenji, trans-Capsaicin; object_uuid=fo-4b18c4a8ccebc7c0
264,829 consensus_match cas_match_labels {"404-86-4":"exactMatch"} group_key=capsaicin||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'404-86-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4b18c4a8ccebc7c0: {'404-86-4': 'exactMatch'}
274,477 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide'
280,917 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… rdkit_post_consensus from 'COc1cc(CNC(=O)CCCC/C=C/C(C)C)ccc1O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,018 strip_catalogue_altlabels altLabel [{"@value":"(6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide","@language":"en","source":{"prov:wasGeneratedBy":… [{"@value":"(6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide","@language":"en","source":{"prov:wasGeneratedBy":… Removed 2 catalogue altLabel value(s): 'NGX 4010' (grade code), 'NSC 56353' (registry code)
301,104 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
388,774 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… typed the way the ontology types it
395,649 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
395,650 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H27NO3"… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/3696 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v1
ef:activity/change/20260821T1554374006150000/3697 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v2
ef:activity/change/20260821T1554374006150000/3698 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v3
ef:activity/change/20260821T1554374006150000/40158 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v4
ef:activity/change/20260821T1554374006150000/40159 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v5
ef:activity/change/20260821T1554374006150000/214575 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v6
ef:activity/change/20260821T1554374006150000/221950 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v7
ef:activity/change/20260821T1554374006150000/230743 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v8
ef:activity/change/20260821T1554374006150000/230744 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v9
ef:activity/change/20260821T1554374006150000/230745 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v10
ef:activity/change/20260821T1554374006150000/249346 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v11
ef:activity/change/20260821T1554374006150000/254853 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v12
ef:activity/change/20260821T1554374006150000/264828 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v13
ef:activity/change/20260821T1554374006150000/264829 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v14
ef:activity/change/20260821T1554374006150000/274477 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v15
ef:activity/change/20260821T1554374006150000/280917 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v16
ef:activity/change/20260821T1554374006150000/288018 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v17
ef:activity/change/20260821T1554374006150000/301104 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v18
ef:activity/change/20260821T1554374006150000/388774 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v19
ef:activity/change/20260821T1554374006150000/395649 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v20
ef:activity/change/20260821T1554374006150000/395650 properties ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-a035-0050c2490048/v21

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