Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'Dowco 213' (trade name), 'M 3180' (grade code), 'NSC 179742' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=cyhexatin||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13121-70-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7fadc15963b2fa94: {'13121-70-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['13121-70-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_4036']; candidate_pubchem_cids=[6327054, 9864905, 25199838, 170843640]; selected_pubchem_cids=[6327054]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
8,914 bootstrap_labels prefLabel [{"@value":"cyhexatin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
8,915 bootstrap_labels name cyhexatin Purged legacy name field to enforce prefLabel usage
8,916 bootstrap_labels synonyms ["Cyhexatin [ANSI:BSI:ISO]","Dowco 213","Dowco-213","ENT 27,395-X","ENT 27395","Hydroxytricyclohexylstannane","Ortho Pl… [] Removed legacy synonyms field in favor of structured labels
40,410 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
40,411 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
216,311 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,204 normalize_name_case prefLabel [{"@value":"cyhexatin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Cyhexatin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
235,715 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
235,716 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
235,717 enrich_references references [] [{"@id":"beilstein:6099492","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['13121-70-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_4036']; candidate_pubchem_cids=[6327054, 9864905, 25199838, 170843640]; selected_pubchem_cids=[6327054]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,772 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… rdkit_pre_consensus from 'C1CCC(CC1)[Sn](C2CCCCC2)C3CCCCC3.O'; added: molecular_mass, monoisotopic_mass
255,669 chebi_altlabels altLabel [] [{"@value":"Tricyclohexylzinnhydroxid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,510 consensus_match altLabel [{"@value":"Tricyclohexylzinnhydroxid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"Tricyclohexylzinnhydroxid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… group_key=cyhexatin||dimension=Environmental > media=Ground > geography=Agricultural; cas=13121-70-5; added Common Chemistry CAS names as altLabel: Acarex, Acarstin, Acarstin L, Dowco 213, Hokko Cyhexatin, M 3180, NSC 179742, Pennstyl, Plictran, Pliktran, Plyctran, Redran 25PB, Sipcatin, Stannane, tricyclohexylhydroxy-, Tin, tricyclohexylhydroxy-, Tricyclohexylstannyl hydroxide; object_uuid=fo-7fadc15963b2fa94
265,511 consensus_match cas_match_labels {"13121-70-5":"exactMatch"} group_key=cyhexatin||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13121-70-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7fadc15963b2fa94: {'13121-70-5': 'exactMatch'}
275,965 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'hydroxytricyclohexylstannane'
282,533 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… rdkit_post_consensus from '[OH][Sn]([CH]1CCCCC1)([CH]1CCCCC1)[CH]1CCCCC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
286,919 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
289,138 strip_catalogue_altlabels altLabel [{"@value":"Tricyclohexylzinnhydroxid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"Tricyclohexylzinnhydroxid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Removed 3 catalogue altLabel value(s): 'Dowco 213' (trade name), 'M 3180' (grade code), 'NSC 179742' (registry code)
301,250 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,315 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H34OSn"… typed the way the ontology types it
397,870 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
397,871 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/8914 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/8915 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/8916 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/40410 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/40411 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/216311 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/223204 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/235715 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/235716 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/235717 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/250772 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/255669 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/265510 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/265511 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/275965 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/282533 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/286919 properties ef:agent/withhold_ambiguous_mass ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/289138 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/301250 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/390315 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/397870 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v21
ef:activity/change/20260820T0738569779880000/397871 roles ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v21 ef:flow/08a91e70-3ddc-11dd-a0b1-0050c2490048/v22

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