Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Bismuth
altLabel 2 chebi_altlabels, consensus_match group_key=bismuth||dimension=Environmental > media=Air > strata=Unknown; cas=7440-69-9; added Common Chemistry CAS names as altLabel: BIE11PB, Bismuth element, Bismuth-209, MeSH ID: D001729; object_uuid=fo-7dc054cfa24eebd3
cas_match_labels 1 consensus_match group_key=bismuth||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-69-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7dc054cfa24eebd3: {'7440-69-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-177-4 from CAS 7440-69-9
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-69-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33301']; candidate_pubchem_cids=[9242, 96478, 5359367, 16048797, 50934699]; selected_pubchem_cids=[]; formula_similarity_expected=['Bi']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
3,098 bootstrap_labels prefLabel [{"@value":"bismuth","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Bootstrapped prefLabel from legacy name field
3,099 bootstrap_labels name bismuth Purged legacy name field to enforce prefLabel usage
8,944 bootstrap_labels synonyms ["83Bi","AC1NSDYX","Bismut","Bismuth, elemental","Bismuth-209","LTBB002773","Wismut","bismuto"] [] Removed legacy synonyms field in favor of structured labels
40,548 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
40,549 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
214,379 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,804 normalize_name_case prefLabel [{"@value":"bismuth","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Bismuth","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,918 ec_cross_check ec_numbers [] ["231-177-4"] Resolved from EC-inventory: 231-177-4 from CAS 7440-69-9
230,164 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0)
230,165 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
230,166 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=7440-69-9","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['7440-69-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33301']; candidate_pubchem_cids=[9242, 96478, 5359367, 16048797, 50934699]; selected_pubchem_cids=[]; formula_similarity_expected=['Bi']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,186 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… rdkit_pre_consensus from '[Bi]'; added: monoisotopic_mass
254,742 chebi_altlabels altLabel [] [{"@value":"83Bi","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,424 consensus_match altLabel [{"@value":"83Bi","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"83Bi","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=bismuth||dimension=Environmental > media=Air > strata=Unknown; cas=7440-69-9; added Common Chemistry CAS names as altLabel: BIE11PB, Bismuth element, Bismuth-209, MeSH ID: D001729; object_uuid=fo-7dc054cfa24eebd3
264,425 consensus_match cas_match_labels {"7440-69-9":"exactMatch"} group_key=bismuth||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-69-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7dc054cfa24eebd3: {'7440-69-9': 'exactMatch'}
274,315 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Bismuth'
280,743 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… rdkit_post_consensus from '[Bi]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
301,319 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
388,612 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… typed the way the ontology types it
395,414 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
395,415 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Bi"],"atte… the substance's answer, copied onto its flow
403,780 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Bismuth","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Bismuth","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichm… element name from the flow object: Bismuth

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/3098 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/3099 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/8944 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/40548 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/40549 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/214379 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/221804 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/226918 ec_numbers ef:agent/ec_cross_check ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/230164 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/230165 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/230166 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/249186 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/254742 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/264424 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/264425 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/274315 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/280743 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/301319 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/388612 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/395414 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/395415 properties ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v20 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v21
ef:activity/change/20260820T0738569779880000/403780 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v21 ef:flow/08a91e70-3ddc-11dd-a0f6-0050c2490048/v22

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