Fonofos
Everything that changed this flow. Back to the flow
08a91e70-3ddc-11dd-a11d-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'N 2790' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=fonofos||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'944-22-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-61fe3e43c9024dd4: {'944-22-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['944-22-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38689']; candidate_pubchem_cids=[13676]; selected_pubchem_cids=[13676]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 8,957 | bootstrap_labels | prefLabel | — | [{"@value":"fonofos","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 8,958 | bootstrap_labels | name | fonofos | — | Purged legacy name field to enforce prefLabel usage |
| 8,959 | bootstrap_labels | synonyms | ["(+-)-Fonofos","(+-)-O-Ethyl S-phenyl ethylphosphonodithioate","(+-)-O-Ethyl S-phenyl ethylphosphonodithioate (8CI)","… | [] | Removed legacy synonyms field in favor of structured labels |
| 40,626 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 40,627 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 216,325 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,216 | normalize_name_case | prefLabel | [{"@value":"fonofos","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Fonofos","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 235,757 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 235,758 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 235,759 | enrich_references | references | [] | [{"@id":"beilstein:1958949","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['944-22-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38689']; candidate_pubchem_cids=[13676]; selected_pubchem_cids=[13676]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,784 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | rdkit_pre_consensus from 'CCOP(=S)(CC)SC1=CC=CC=C1'; added: monoisotopic_mass |
| 255,680 | chebi_altlabels | altLabel | [] | [{"@value":"(+-)-O-Ethyl S-phenyl ethylphosphonodithioate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… | Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,292 | consensus_match | altLabel | [{"@value":"(+-)-O-Ethyl S-phenyl ethylphosphonodithioate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… | [{"@value":"(+-)-O-Ethyl S-phenyl ethylphosphonodithioate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… | group_key=fonofos||dimension=Environmental > media=Ground > geography=Agricultural; cas=944-22-9; added Common Chemistry CAS names as altLabel: (±)-Fonofos, <em>O</em>-Ethyl <em>S</em>-phenyl ethyldithiophosphonate, Difonate, Difonatul, Dyfonat, Dyfonate, Dyfonate 10G, Dyfonate 20G, Fonophos, MeSH ID: D004397, N 2790, Phosphonodithioic acid, <em>P</em>-ethyl-, <em>O</em>-ethyl <em>S</em>-phenyl ester, Phosphonodithioic acid, ethyl-, <em>O</em>-ethyl <em>S</em>-phenyl ester, Stauffer N 2790; object_uuid=fo-61fe3e43c9024dd4 |
| 267,293 | consensus_match | cas_match_labels | — | {"944-22-9":"exactMatch"} | group_key=fonofos||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'944-22-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-61fe3e43c9024dd4: {'944-22-9': 'exactMatch'} |
| 275,979 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(+-)-O-Ethyl S-phenyl ethylphosphonodithioate' |
| 282,547 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | rdkit_post_consensus from 'CCOP(=S)(CC)Sc1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,151 | strip_catalogue_altlabels | altLabel | [{"@value":"(+-)-O-Ethyl S-phenyl ethylphosphonodithioate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… | [{"@value":"(+-)-O-Ethyl S-phenyl ethylphosphonodithioate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… | Removed 1 catalogue altLabel value(s): 'N 2790' (grade code) |
| 301,358 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… | associations resolved on the elementary layer |
| 390,329 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H15OPS2… | typed the way the ontology types it |
| 397,892 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 397,893 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/8957 | prefLabel | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v0 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v1 |
| ef:activity/change/20260820T0738569779880000/8958 | name | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v1 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v2 |
| ef:activity/change/20260820T0738569779880000/8959 | synonyms | ef:agent/bootstrap_labels | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v2 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v3 |
| ef:activity/change/20260820T0738569779880000/40626 | context | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v3 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v4 |
| ef:activity/change/20260820T0738569779880000/40627 | context_iri | ef:agent/default_context_mapping | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v4 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v5 |
| ef:activity/change/20260820T0738569779880000/216325 | unit_iri | ef:agent/unit_normalization | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v5 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v6 |
| ef:activity/change/20260820T0738569779880000/223216 | prefLabel | ef:agent/normalize_name_case | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v6 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v7 |
| ef:activity/change/20260820T0738569779880000/235757 | properties | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v7 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v8 |
| ef:activity/change/20260820T0738569779880000/235758 | skos_definition | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v8 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v9 |
| ef:activity/change/20260820T0738569779880000/235759 | references | ef:agent/enrich_references | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v9 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v10 |
| ef:activity/change/20260820T0738569779880000/250784 | properties | ef:agent/rdkit_pre_consensus | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v10 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v11 |
| ef:activity/change/20260820T0738569779880000/255680 | altLabel | ef:agent/chebi_altlabels | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v11 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v12 |
| ef:activity/change/20260820T0738569779880000/267292 | altLabel | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v12 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v13 |
| ef:activity/change/20260820T0738569779880000/267293 | cas_match_labels | ef:agent/consensus_match | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v13 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v14 |
| ef:activity/change/20260820T0738569779880000/275979 | properties | ef:agent/opsin_iupac | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v14 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v15 |
| ef:activity/change/20260820T0738569779880000/282547 | properties | ef:agent/rdkit_post_consensus | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v15 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v16 |
| ef:activity/change/20260820T0738569779880000/289151 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v16 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v17 |
| ef:activity/change/20260820T0738569779880000/301358 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v17 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v18 |
| ef:activity/change/20260820T0738569779880000/390329 | properties | ef:agent/normalise_property_values | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v18 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v19 |
| ef:activity/change/20260820T0738569779880000/397892 | types | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v19 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v20 |
| ef:activity/change/20260820T0738569779880000/397893 | roles | ef:agent/link_flows_to_their_substance | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v20 | ef:flow/08a91e70-3ddc-11dd-a11d-0050c2490048/v21 |