Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'CH 13437' (grade code), 'SU 13437' (grade code), 'SU-13437' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=nafenopin||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'pubchem']; cas_sources={'3771-19-5': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f02717263d75fbc7: {'3771-19-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['3771-19-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7449', 'http://purl.obolibrary.org/obo/CHEBI_77649']; candidate_pubchem_cids=[19592]; selected_pubchem_cids=[19592]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
9,087 bootstrap_labels prefLabel [{"@value":"nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
9,088 bootstrap_labels name nafenopin Purged legacy name field to enforce prefLabel usage
9,089 bootstrap_labels synonyms ["2-Methyl-2-(4-(1,2,3,4-tetrahydro-1-naphthalenyl)phenoxy)propanoic acid","2-Methyl-2-(4-(1,2,3,4-tetrahydro-1-naphthy… [] Removed legacy synonyms field in favor of structured labels
41,310 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
41,311 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
216,362 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,239 normalize_name_case prefLabel [{"@value":"nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
235,878 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… Added ChEBI/PubChem properties (chebi_ids=2, pubchem_cids=1)
235,879 enrich_references skos_definition [{"@value":"A monocarboxylic acid that is 2-hydroxy-2-methylpropanoic acid in which ther tertiary hydroxy group has bee… Merged ChEBI/PubChem definitions into skos:definition
235,880 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J8.248A","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['3771-19-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7449', 'http://purl.obolibrary.org/obo/CHEBI_77649']; candidate_pubchem_cids=[19592]; selected_pubchem_cids=[19592]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,815 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… rdkit_pre_consensus from 'CC(C)(C(=O)O)OC1=CC=C(C=C1)C2CCCC3=CC=CC=C23'; added: monoisotopic_mass
255,699 chebi_altlabels altLabel [] [{"@value":"(+-)-nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Added 20 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s)
269,695 consensus_match altLabel [{"@value":"(+-)-nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(+-)-nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… group_key=nafenopin||dimension=Environmental > media=Water > water_body=Surface water; cas=3771-19-5; added Common Chemistry CAS names as altLabel: 2-Methyl-2-[4-(1,2,3,4-tetrahydro-1-naphthalenyl)phenoxy]propanoic acid, 2-Methyl-2-[4-(1,2,3,4-tetrahydro-1-naphthyl)phenoxy]propionic acid, 2-Methyl-2-[<em>p</em>-(1,2,3,4-tetrahydro-1-naphthyl)phenoxy]propionate, 2-Methyl-2-[<em>p</em>-(1,2,3,4-tetrahydro-1-naphthyl)phenoxy]propionic acid, C 13437Su, CIBA 13,437SU, CIBA 13437Su, Propanoic acid, 2-methyl-2-[4-(1,2,3,4-tetrahydro-1-naphthalenyl)phenoxy]-, Propionic acid, 2-methyl-2-[<em>p</em>-(1,2,3,4-tetrahydro-1-naphthyl)phenoxy]-, SU 13.437, TPIA; object_uuid=fo-f02717263d75fbc7
269,696 consensus_match cas_match_labels {"3771-19-5":"exactMatch"} group_key=nafenopin||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'pubchem']; cas_sources={'3771-19-5': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f02717263d75fbc7: {'3771-19-5': 'exactMatch'}
276,001 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-methyl-2-[4-(1,2,3,4-tetrahydronaphthalen-1-yl)phenoxy]propanoic acid'
282,570 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… rdkit_post_consensus from 'CC(C)(Oc1ccc(C2CCCc3ccccc32)cc1)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,163 strip_catalogue_altlabels altLabel [{"@value":"(+-)-nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(+-)-nafenopin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Removed 3 catalogue altLabel value(s): 'CH 13437' (grade code), 'SU 13437' (grade code), 'SU-13437' (grade code)
301,680 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/08a91e70-3ddc-… associations resolved on the elementary layer
390,348 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H22O3"]… typed the way the ontology types it
397,919 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/9087 prefLabel ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v0 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v1
ef:activity/change/20260822T0600486828500000/9088 name ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v1 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v2
ef:activity/change/20260822T0600486828500000/9089 synonyms ef:agent/bootstrap_labels ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v2 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v3
ef:activity/change/20260822T0600486828500000/41310 context ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v3 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v4
ef:activity/change/20260822T0600486828500000/41311 context_iri ef:agent/default_context_mapping ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v4 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v5
ef:activity/change/20260822T0600486828500000/216362 unit_iri ef:agent/unit_normalization ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v5 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v6
ef:activity/change/20260822T0600486828500000/223239 prefLabel ef:agent/normalize_name_case ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v6 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v7
ef:activity/change/20260822T0600486828500000/235878 properties ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v7 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v8
ef:activity/change/20260822T0600486828500000/235879 skos_definition ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v8 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v9
ef:activity/change/20260822T0600486828500000/235880 references ef:agent/enrich_references ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v9 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v10
ef:activity/change/20260822T0600486828500000/250815 properties ef:agent/rdkit_pre_consensus ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v10 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v11
ef:activity/change/20260822T0600486828500000/255699 altLabel ef:agent/chebi_altlabels ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v11 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v12
ef:activity/change/20260822T0600486828500000/269695 altLabel ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v12 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v13
ef:activity/change/20260822T0600486828500000/269696 cas_match_labels ef:agent/consensus_match ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v13 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v14
ef:activity/change/20260822T0600486828500000/276001 properties ef:agent/opsin_iupac ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v14 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v15
ef:activity/change/20260822T0600486828500000/282570 properties ef:agent/rdkit_post_consensus ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v15 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v16
ef:activity/change/20260822T0600486828500000/289163 altLabel ef:agent/strip_catalogue_altlabels ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v16 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v17
ef:activity/change/20260822T0600486828500000/301680 concept_associations ef:agent/carry_associations_onto_flows ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v17 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v18
ef:activity/change/20260822T0600486828500000/390348 properties ef:agent/normalise_property_values ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v18 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v19
ef:activity/change/20260822T0600486828500000/397919 types ef:agent/link_flows_to_their_substance ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v19 ef:flow/08a91e70-3ddc-11dd-a276-0050c2490048/v20

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