Indole-3-acetic acid
Everything that changed this flow. Back to the flow
09617a8a-71d0-417f-bf8b-514e98962dfc
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 3787' (registry code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=87-51-4; cc_chebi_agreed_name='Indole-3-acetic acid'; object_uuid=fo-6b54ae72c13c240b |
| cas_match_labels | 1 | consensus_match | group_key=indol-3-ylaceticacid||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'87-51-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6b54ae72c13c240b: {'87-51-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['87-51-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16411']; candidate_pubchem_cids=[801, 802, 114616, 248097, 597147]; selected_pubchem_cids=[802]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 5,232 | bootstrap_labels | prefLabel | — | [{"@value":"indol-3-ylacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | Bootstrapped prefLabel from legacy name field |
| 5,233 | bootstrap_labels | name | indol-3-ylacetic acid | — | Purged legacy name field to enforce prefLabel usage |
| 5,234 | bootstrap_labels | synonyms | ["(1H-Indol-3-yl)acetic acid","(indol-3-yl)acetate","(indol-3-yl)acetic acid",".alpha.-IAA",".alpha.-Indol-3-yl-acetic… | [] | Removed legacy synonyms field in favor of structured labels |
| 42,122 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| 42,123 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-noag | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil |
| 215,093 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,306 | normalize_name_case | prefLabel | [{"@value":"indol-3-ylacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | [{"@value":"Indol-3-ylacetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 232,219 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 232,220 | enrich_references | skos_definition | — | [{"@value":"A monocarboxylic acid that is acetic acid in which one of the methyl hydrogens has been replaced by a 1H-in… | Merged ChEBI/PubChem definitions into skos:definition |
| 232,221 | enrich_references | references | [] | [{"@id":"bpdb:1106","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consens… | Added references with provenance; cas_numbers=['87-51-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16411']; candidate_pubchem_cids=[801, 802, 114616, 248097, 597147]; selected_pubchem_cids=[802]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,769 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | rdkit_pre_consensus from 'C1=CC=C2C(=C1)C(=CN2)CC(=O)O'; added: monoisotopic_mass |
| 255,051 | chebi_altlabels | altLabel | [] | [{"@value":"(Indol-3-yl)acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,973 | consensus_match | prefLabel | [{"@value":"Indol-3-ylacetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | [{"@value":"Indole-3-acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttribute… | cas=87-51-4; cc_chebi_agreed_name='Indole-3-acetic acid'; object_uuid=fo-6b54ae72c13c240b |
| 267,974 | consensus_match | altLabel | [{"@value":"(Indol-3-yl)acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | [{"@value":"(Indol-3-yl)acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | cas=87-51-4; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-6b54ae72c13c240b |
| 267,975 | consensus_match | altLabel | [{"@value":"(Indol-3-yl)acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | [{"@value":"(Indol-3-yl)acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | group_key=indol-3-ylaceticacid||dimension=Environmental > media=Water > water_body=Long-term; cas=87-51-4; added Common Chemistry CAS names as altLabel: (1<em>H</em>-Indol-3-yl)acetic acid, 1<em>H</em>-Indole-3-acetic acid, 2-(1<em>H</em>-Indol-3-yl)acetic acid, 2-(3-Indolyl)acetic acid, 3-(Carboxymethyl)-1<em>H</em>-indole, 3-(Carboxymethyl)indole, 3-IAA, 3-Indolylmethylcarboxylic acid, Bioenraiz, GAP, NSC 3787, Noclosan, Rhizopin, α-IAA, β-IAA, β-Indoleacetic acid; object_uuid=fo-6b54ae72c13c240b |
| 267,976 | consensus_match | cas_match_labels | — | {"87-51-4":"exactMatch"} | group_key=indol-3-ylaceticacid||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'87-51-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6b54ae72c13c240b: {'87-51-4': 'exactMatch'} |
| 274,923 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Indole-3-acetic acid' |
| 281,395 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | rdkit_post_consensus from 'O=C(O)Cc1c[nH]c2ccccc12'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,347 | strip_catalogue_altlabels | altLabel | [{"@value":"(Indol-3-yl)acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | [{"@value":"(Indol-3-yl)acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | Removed 1 catalogue altLabel value(s): 'NSC 3787' (registry code) |
| 302,106 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/09617a8a-71d0-… | associations resolved on the elementary layer |
| 389,228 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H9NO2"]… | typed the way the ontology types it |
| 396,278 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,279 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_26155","rdfs:label":"plant growth regulator","http://www.w3.org/2004/02/s… | the substance's answer, copied onto its flow |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/5232 | prefLabel | ef:agent/bootstrap_labels | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v0 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v1 |
| ef:activity/change/20260820T0738569779880000/5233 | name | ef:agent/bootstrap_labels | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v1 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v2 |
| ef:activity/change/20260820T0738569779880000/5234 | synonyms | ef:agent/bootstrap_labels | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v2 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v3 |
| ef:activity/change/20260820T0738569779880000/42122 | context | ef:agent/default_context_mapping | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v3 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v4 |
| ef:activity/change/20260820T0738569779880000/42123 | context_iri | ef:agent/default_context_mapping | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v4 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v5 |
| ef:activity/change/20260820T0738569779880000/215093 | unit_iri | ef:agent/unit_normalization | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v5 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v6 |
| ef:activity/change/20260820T0738569779880000/222306 | prefLabel | ef:agent/normalize_name_case | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v6 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v7 |
| ef:activity/change/20260820T0738569779880000/232219 | properties | ef:agent/enrich_references | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v7 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v8 |
| ef:activity/change/20260820T0738569779880000/232220 | skos_definition | ef:agent/enrich_references | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v8 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v9 |
| ef:activity/change/20260820T0738569779880000/232221 | references | ef:agent/enrich_references | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v9 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v10 |
| ef:activity/change/20260820T0738569779880000/249769 | properties | ef:agent/rdkit_pre_consensus | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v10 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v11 |
| ef:activity/change/20260820T0738569779880000/255051 | altLabel | ef:agent/chebi_altlabels | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v11 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v12 |
| ef:activity/change/20260820T0738569779880000/267973 | prefLabel | ef:agent/consensus_match | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v12 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v13 |
| ef:activity/change/20260820T0738569779880000/267974 | altLabel | ef:agent/consensus_match | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v13 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v14 |
| ef:activity/change/20260820T0738569779880000/267975 | altLabel | ef:agent/consensus_match | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v14 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v15 |
| ef:activity/change/20260820T0738569779880000/267976 | cas_match_labels | ef:agent/consensus_match | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v15 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v16 |
| ef:activity/change/20260820T0738569779880000/274923 | properties | ef:agent/opsin_iupac | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v16 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v17 |
| ef:activity/change/20260820T0738569779880000/281395 | properties | ef:agent/rdkit_post_consensus | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v17 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v18 |
| ef:activity/change/20260820T0738569779880000/288347 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v18 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v19 |
| ef:activity/change/20260820T0738569779880000/302106 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v19 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v20 |
| ef:activity/change/20260820T0738569779880000/389228 | properties | ef:agent/normalise_property_values | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v20 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v21 |
| ef:activity/change/20260820T0738569779880000/396278 | types | ef:agent/link_flows_to_their_substance | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v21 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v22 |
| ef:activity/change/20260820T0738569779880000/396279 | roles | ef:agent/link_flows_to_their_substance | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v22 | ef:flow/09617a8a-71d0-417f-bf8b-514e98962dfc/v23 |