Oxalic Acid
Everything that changed this flow. Back to the flow
09afcea6-100b-4039-ac3a-32f3406f85b1
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 4 catalogue altLabel value(s): 'NSC 132055' (registry code), 'NSC 151956' (registry code), 'NSC 62774' (registry code), 'NSC 76990' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=oxalicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'144-62-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ab87f1f8636d132f: {'144-62-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['144-62-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16995']; candidate_pubchem_cids=[971, 71081, 18676629, 118998413]; selected_pubchem_cids=[971]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 9,588 | bootstrap_labels | prefLabel | — | [{"@value":"oxalic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Bootstrapped prefLabel from legacy name field |
| 9,589 | bootstrap_labels | name | oxalic acid | — | Purged legacy name field to enforce prefLabel usage |
| 9,590 | bootstrap_labels | synonyms | ["1o4n","1t5a","2dua","2hwg","AC1L1AFW","AC1Q28J7","Acide oxalique","Acido ossalico","Acidum oxalicum","Aktisal","Aquis… | [] | Removed legacy synonyms field in favor of structured labels |
| 42,312 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 42,313 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 216,526 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,342 | normalize_name_case | prefLabel | [{"@value":"oxalic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | [{"@value":"Oxalic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 236,345 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 236,346 | enrich_references | skos_definition | — | [{"@value":"An α,ω-dicarboxylic acid that is ethane substituted by carboxyl groups at positions 1 and 2.","@language":"… | Merged ChEBI/PubChem definitions into skos:definition |
| 236,347 | enrich_references | references | [] | [{"@id":"gmelin:2208","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… | Added references with provenance; cas_numbers=['144-62-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16995']; candidate_pubchem_cids=[971, 71081, 18676629, 118998413]; selected_pubchem_cids=[971]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,949 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | rdkit_pre_consensus from 'C(=O)(C(=O)O)O'; added: monoisotopic_mass |
| 255,755 | chebi_altlabels | altLabel | [] | [{"@value":"Ethandisaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,201 | consensus_match | altLabel | [{"@value":"Ethandisaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | [{"@value":"Ethandisaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | group_key=oxalicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=144-62-7; added Common Chemistry CAS names as altLabel: Aktisal, Aquisal, DeerClean, MeSH ID: D019815, NSC 132055, NSC 151956, NSC 62774, NSC 76990, Ultraplast Activate S 52; object_uuid=fo-ab87f1f8636d132f |
| 270,202 | consensus_match | cas_match_labels | — | {"144-62-7":"exactMatch"} | group_key=oxalicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'144-62-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ab87f1f8636d132f: {'144-62-7': 'exactMatch'} |
| 276,139 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Oxalic Acid' |
| 282,715 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | rdkit_post_consensus from 'O=C(O)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,264 | strip_catalogue_altlabels | altLabel | [{"@value":"Ethandisaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | [{"@value":"Ethandisaeure","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | Removed 4 catalogue altLabel value(s): 'NSC 132055' (registry code), 'NSC 151956' (registry code), 'NSC 62774' (registry code), 'NSC 76990' (registry code) |
| 302,181 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/09afcea6-100b-… | associations resolved on the elementary layer |
| 390,482 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O4"],"… | typed the way the ontology types it |
| 398,108 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/9588 | prefLabel | ef:agent/bootstrap_labels | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v0 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v1 |
| ef:activity/change/20260822T0600486828500000/9589 | name | ef:agent/bootstrap_labels | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v1 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v2 |
| ef:activity/change/20260822T0600486828500000/9590 | synonyms | ef:agent/bootstrap_labels | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v2 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v3 |
| ef:activity/change/20260822T0600486828500000/42312 | context | ef:agent/default_context_mapping | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v3 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v4 |
| ef:activity/change/20260822T0600486828500000/42313 | context_iri | ef:agent/default_context_mapping | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v4 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v5 |
| ef:activity/change/20260822T0600486828500000/216526 | unit_iri | ef:agent/unit_normalization | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v5 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v6 |
| ef:activity/change/20260822T0600486828500000/223342 | prefLabel | ef:agent/normalize_name_case | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v6 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v7 |
| ef:activity/change/20260822T0600486828500000/236345 | properties | ef:agent/enrich_references | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v7 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v8 |
| ef:activity/change/20260822T0600486828500000/236346 | skos_definition | ef:agent/enrich_references | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v8 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v9 |
| ef:activity/change/20260822T0600486828500000/236347 | references | ef:agent/enrich_references | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v9 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v10 |
| ef:activity/change/20260822T0600486828500000/250949 | properties | ef:agent/rdkit_pre_consensus | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v10 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v11 |
| ef:activity/change/20260822T0600486828500000/255755 | altLabel | ef:agent/chebi_altlabels | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v11 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v12 |
| ef:activity/change/20260822T0600486828500000/270201 | altLabel | ef:agent/consensus_match | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v12 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v13 |
| ef:activity/change/20260822T0600486828500000/270202 | cas_match_labels | ef:agent/consensus_match | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v13 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v14 |
| ef:activity/change/20260822T0600486828500000/276139 | properties | ef:agent/opsin_iupac | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v14 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v15 |
| ef:activity/change/20260822T0600486828500000/282715 | properties | ef:agent/rdkit_post_consensus | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v15 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v16 |
| ef:activity/change/20260822T0600486828500000/289264 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v16 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v17 |
| ef:activity/change/20260822T0600486828500000/302181 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v17 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v18 |
| ef:activity/change/20260822T0600486828500000/390482 | properties | ef:agent/normalise_property_values | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v18 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v19 |
| ef:activity/change/20260822T0600486828500000/398108 | types | ef:agent/link_flows_to_their_substance | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v19 | ef:flow/09afcea6-100b-4039-ac3a-32f3406f85b1/v20 |