Nicotine
Everything that changed this flow. Back to the flow
0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 5065' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=nicotine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'54-11-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6a859f92a7e3227f: {'54-11-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['54-11-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17688']; candidate_pubchem_cids=[942, 89594, 157672]; selected_pubchem_cids=[89594]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 4,281 | bootstrap_labels | prefLabel | — | [{"@value":"nicotine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Bootstrapped prefLabel from legacy name field |
| 4,282 | bootstrap_labels | name | nicotine | — | Purged legacy name field to enforce prefLabel usage |
| 10,555 | bootstrap_labels | synonyms | ["3-[(2s)-1-methylpyrrolidin-2-yl]pyridine","nicotine","nicotine(iso)","3-(1-methyl-pyrrolidin-2-yl)-pyridine","pyridin… | [] | Removed legacy synonyms field in favor of structured labels |
| 43,244 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 43,245 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 214,775 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,084 | normalize_name_case | prefLabel | [{"@value":"nicotine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | [{"@value":"Nicotine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 231,306 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 231,307 | enrich_references | skos_definition | — | [{"@value":"A 3-(1-methylpyrrolidin-2-yl)pyridine in which the chiral centre has S-configuration. The naturally occurri… | Merged ChEBI/PubChem definitions into skos:definition |
| 231,308 | enrich_references | references | [] | [{"@id":"beilstein:3604351","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['54-11-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17688']; candidate_pubchem_cids=[942, 89594, 157672]; selected_pubchem_cids=[89594]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,510 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | rdkit_pre_consensus from 'CN1CCCC1C2=CN=CC=C2'; added: inchi2d_string, monoisotopic_mass |
| 254,926 | chebi_altlabels | altLabel | [] | [{"@value":"(-)-3-(1-Methyl-2-pyrrolidyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | Added 18 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 269,875 | consensus_match | altLabel | [{"@value":"(-)-3-(1-Methyl-2-pyrrolidyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | [{"@value":"(-)-3-(1-Methyl-2-pyrrolidyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | group_key=nicotine||dimension=Environmental > media=Air > strata=Unknown; cas=54-11-5; added Common Chemistry CAS names as altLabel: (-)-(<em>S</em>)-Nicotine, (-)-β-Pyridyl-α-<em>N</em>-methylpyrrolidine, (<em>S</em>)-3-(1-Methyl-2-pyrrolidinyl)pyridine, 3-[(2<em>S</em>)-1-Methyl-2-pyrrolidinyl]pyridine, Exodus, Flux Maag, Habitrol, MeSH ID: D009538, NSC 5065, Nicabate, Nicoderm, Nicolan, Niconil, Nicopatch, Nicorette, Nicotell TTS, Nicotin, Nicotinell, Nicotrol, Nikofrenon, Niquitin, Pyridine, 3-(1-methyl-2-pyrrolidinyl)-, (<em>S</em>)-, Pyridine, 3-[(2<em>S</em>)-1-methyl-2-pyrrolidinyl]-, Tabazur, XL All Insecticide; object_uuid=fo-6a859f92a7e3227f |
| 269,876 | consensus_match | cas_match_labels | — | {"54-11-5":"exactMatch"} | group_key=nicotine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'54-11-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6a859f92a7e3227f: {'54-11-5': 'exactMatch'} |
| 281,109 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | rdkit_post_consensus from 'CN1CCCC1C2=CN=CC=C2'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,146 | strip_catalogue_altlabels | altLabel | [{"@value":"(-)-3-(1-Methyl-2-pyrrolidyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | [{"@value":"(-)-3-(1-Methyl-2-pyrrolidyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | Removed 1 catalogue altLabel value(s): 'NSC 5065' (registry code) |
| 302,668 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0b6c794c-8fd9-… | associations resolved on the elementary layer |
| 388,962 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | typed the way the ontology types it |
| 395,907 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 395,908 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24852","rdfs:label":"insecticide","http://www.w3.org/2004/02/skos/core#de… | the substance's answer, copied onto its flow |
| 395,909 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H14N2"]… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/4281 | prefLabel | ef:agent/bootstrap_labels | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v0 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v1 |
| ef:activity/change/20260820T0738569779880000/4282 | name | ef:agent/bootstrap_labels | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v1 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v2 |
| ef:activity/change/20260820T0738569779880000/10555 | synonyms | ef:agent/bootstrap_labels | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v2 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v3 |
| ef:activity/change/20260820T0738569779880000/43244 | context | ef:agent/default_context_mapping | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v3 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v4 |
| ef:activity/change/20260820T0738569779880000/43245 | context_iri | ef:agent/default_context_mapping | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v4 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v5 |
| ef:activity/change/20260820T0738569779880000/214775 | unit_iri | ef:agent/unit_normalization | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v5 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v6 |
| ef:activity/change/20260820T0738569779880000/222084 | prefLabel | ef:agent/normalize_name_case | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v6 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v7 |
| ef:activity/change/20260820T0738569779880000/231306 | properties | ef:agent/enrich_references | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v7 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v8 |
| ef:activity/change/20260820T0738569779880000/231307 | skos_definition | ef:agent/enrich_references | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v8 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v9 |
| ef:activity/change/20260820T0738569779880000/231308 | references | ef:agent/enrich_references | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v9 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v10 |
| ef:activity/change/20260820T0738569779880000/249510 | properties | ef:agent/rdkit_pre_consensus | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v10 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v11 |
| ef:activity/change/20260820T0738569779880000/254926 | altLabel | ef:agent/chebi_altlabels | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v11 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v12 |
| ef:activity/change/20260820T0738569779880000/269875 | altLabel | ef:agent/consensus_match | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v12 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v13 |
| ef:activity/change/20260820T0738569779880000/269876 | cas_match_labels | ef:agent/consensus_match | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v13 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v14 |
| ef:activity/change/20260820T0738569779880000/281109 | properties | ef:agent/rdkit_post_consensus | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v14 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v15 |
| ef:activity/change/20260820T0738569779880000/288146 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v15 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v16 |
| ef:activity/change/20260820T0738569779880000/302668 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v16 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v17 |
| ef:activity/change/20260820T0738569779880000/388962 | properties | ef:agent/normalise_property_values | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v17 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v18 |
| ef:activity/change/20260820T0738569779880000/395907 | types | ef:agent/link_flows_to_their_substance | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v18 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v19 |
| ef:activity/change/20260820T0738569779880000/395908 | roles | ef:agent/link_flows_to_their_substance | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v19 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v20 |
| ef:activity/change/20260820T0738569779880000/395909 | properties | ef:agent/link_flows_to_their_substance | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v20 | ef:flow/0b6c794c-8fd9-4f87-a1fa-6557c96ae9a1/v21 |